Trichomycterus rosablanca: 134326542
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Entry
134326542 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134326542
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134326542
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
Prok-RING_4
U-box
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
134326542
NCBI-ProteinID:
XP_062864786
LinkDB
All DBs
Position
14:complement(18751919..18756192)
Genome browser
AA seq
554 aa
AA seq
DB search
MAESKMSVTQDEFSCSICLETLKDPVTTSCGHSFCVVCINNCWDQEDDNGTYSCPQCRKT
FTPRPEVSKNIILANIVENLKKRESQVPPPAGPEDVECDSCTGTKYKAVKSCLVCLASFC
ETHLQPHYQIPSYKKHKLVKASRRLQEQICSQHNKLLEVYCRTDQQCICTLCMLDNHKGH
DTISAAAERTEKQKQLLEIQRKFQKIIQNREKELCELINAVESHKCSAQTAVKNIERICT
ELINSINRRCSELKDLIRDRETAEVSQAENVLKQAEQQIVELKRKDAELEQLSHTEDPVH
FLQNFQSLSAPAGSAESAAVTISPFLSFDDVTKSVSQLREKVEEFWKEQCEKIPDEVKKV
QITSPPEPEIREDFLHYFCRFTLDPNTVNKNLRLSEENKVVTWSGTLQSYPDHPDRFDGY
CQVVCRESVSGRCYWEVEWSGINGVFIAVSYKSISRKGRGGECGFGRNDQCWSLFCSPSR
FSFLHDNKETKIPSMPSFSRIGVYVDYEAGTLSFYSVSDTMKLLHRVQTTFTQLLYPGFG
FCLGSKVILSHLTN
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtcaaaaatgtcagtaactcaggatgagttcagctgttcaatctgtctggaa
acactgaaggatccagtaactacatcatgtggacacagtttctgtgtggtgtgtattaat
aactgctgggatcaggaggatgataatggaacatacagctgtccacagtgtagaaaaacc
ttcactccaagacctgaagtgagtaaaaacattattctggcaaacattgtagagaatctg
aaaaagagagaatcccaagttccacctcctgctggacctgaagatgtggagtgtgattcc
tgcactgggacaaaatacaaagctgttaaatcctgtctggtgtgtttggcctctttctgt
gaaactcaccttcagcctcattatcaaattccttcttataagaagcacaagctggttaaa
gcctccagacgactccaggagcagatctgctctcagcataataaactgctggaggtttac
tgtcgtactgatcagcagtgtatctgcacgttgtgtatgctagacaatcataaaggacat
gatacaatatcagctgcagcagaaagaactgagaaacagaagcagctgctggagatccag
agaaaattccagaagataattcagaacagagagaaggaactttgtgagctgataaatgct
gtggagtctcacaagtgttctgcacagacagcagtgaagaacattgagaggatctgtact
gaactaatcaactcaattaacagaagatgctctgagctaaaagatctgatcagagatcga
gagacagcagaagtaagtcaagctgaaaatgtcctgaaacaggcggagcagcagattgta
gagctgaagaggaaagatgctgaactggaacagctttcacacacagaggatcccgtccat
ttcctccagaattttcagtctctctcggctcctgctggatctgcagaatcagctgctgtc
acaatcagtccttttctctcatttgatgatgttacaaagtctgtatctcagctgagagag
aaagtagaagaattctggaaagagcagtgtgagaagataccagatgaagtgaagaaagtc
cagattacttcacctcctgaacctgaaatcagagaagattttctacactatttttgtcgg
tttacactggatccaaacacagtaaataaaaacctccgtctgtctgaggagaacaaagtg
gtgacctggagtggaacattacagtcgtatcctgatcatccagatagatttgatggttac
tgccaggttgtgtgtagagagagtgtgagtggacgctgttactgggaggttgagtggagt
gggattaatggggtttttatagcagtgtcatataaaagcatcagcaggaagggacgtggt
ggtgagtgtgggtttggacggaatgatcagtgttggagtttgttctgttctccatccaga
ttttcattcttgcacgacaacaaagagactaaaattccctcaatgccgagtttctctaga
ataggagtgtatgtggattatgaagcaggaactctgtccttttacagcgtctctgataca
atgaagctcctccacagagttcagaccacgttcactcagctcctctacccggggtttggt
ttttgtttagggtcaaaagtgatactgtcacatttaacaaattaa
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