Trichomycterus rosablanca: 134326545
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Entry
134326545 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134326545
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134326545
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-ANAPC11
zf-RING_6
zf-RING_10
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
134326545
NCBI-ProteinID:
XP_062864788
LinkDB
All DBs
Position
14:complement(18636604..18665496)
Genome browser
AA seq
554 aa
AA seq
DB search
MAESKISVTQDELSCSVCLKTLKDPVTTHCGHSFCMVCINNCWDQEDDKGTYSCPQCRQI
FTPRPVVKRNTILAGVVEKLEKTELQAPRPGHCSAGPEDVECDFCTERKSQAVKSCLVCL
ASFCETHLQPHYRIPVYKTHKLVKASRRLQDQICFQHDKLLEVYCHTDQQCICLMCTTDD
HKGHDTISAAAERTEKQKQLLEIQRKFQKKIQNREKEFCELINAVESHKCSAQTAVKNIE
RICTELINSINRRCSELKDLIRDQETAEVSRAEKVLKQVEQQIVELKMKDAELEQLSHTE
DPVHFLQNFQSLLAPAGSAELAAITISPFLSFDDVTKSVSQLREKVEEFWKEQCEMISDG
VKKVRITSPPEPEIREDFLQYVCRFTLDPNTVNKNLHLSEENKVATWSTTLQSYPDHPDR
FDYFWQVVCRESVSGRCYWEVELSGNYWVYIAVSYKSISRKRRGGECLFGGNDQSWSLFC
SPSRFSFWHNNKGTEIPIMPSFSRIGVYVDYEAGTLSFYSVSDTMKLLYRVQTTFTQLLY
PGFYLYSGSVKLSD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtccaaaatttcagtaactcaggatgagttgagctgctcagtttgtctgaaa
acactgaaggatccagtaactacacactgtggacacagtttctgtatggtgtgtattaat
aactgctgggatcaggaggatgataagggaacatacagctgtccacagtgtagacaaatc
tttactccaagacctgttgtgaaaagaaacaccattctggctggagttgtggagaaactg
gagaaaacagaacttcaagctccccgtcctggtcactgttctgctggacctgaagatgtg
gagtgtgatttctgtacagagagaaaatcccaagcagtaaaatcctgtctggtgtgtttg
gcctctttctgtgaaactcaccttcagcctcattatcgaattcctgtttataagactcac
aagctggttaaagcctccagacgactccaggatcagatctgctttcagcatgataaactg
ctggaggtttactgtcacactgatcagcagtgtatctgcctgatgtgtaccacggatgat
cataagggacatgatacaatatcagctgcagcagaaagaactgagaaacagaagcagctg
ctggagatccagagaaaattccaaaagaaaatccagaacagagagaaggaattttgtgag
ctgataaacgctgtggagtctcacaagtgttctgcacagacagcagtgaagaacattgag
aggatctgtactgaactaatcaactcaattaacagaagatgctctgagctaaaagatctg
atcagagatcaagagacagcagaagtaagtcgagctgaaaaagtcctgaagcaggtggag
cagcagattgtagagctgaagatgaaagatgctgaactggaacagctttcacacacagag
gatcccgtccattttctccagaattttcagtctctcttggctcctgctggatctgcagaa
ttagccgccatcacaatcagtcctttcctctcatttgatgatgttacaaagtctgtatct
cagctgagagagaaagtagaagaattctggaaagagcagtgtgagatgatatcagatgga
gtgaagaaagtccggattacttcaccccctgaacctgaaatcagagaagattttctacaa
tatgtttgtcggttcacactggatccaaacacagtaaataaaaatctccatctgtctgag
gagaacaaagtggcgacctggagtacaacattacagtcgtatcctgatcatccagataga
tttgattatttctggcaggttgtgtgtagagagagtgtgagtggacgctgttactgggag
gttgagttgagtgggaattattgggtttatatagcagtgtcatataaaagcatcagcagg
aagaggcgtggtggtgagtgtttgttcggaggtaatgatcagtcctggagtttgttctgt
tctccatccagattttcattctggcacaataacaaagggactgaaattcccataatgccg
agtttctctagaataggagtgtatgtggattatgaagcaggaactctgtccttctacagc
gtctctgatacaatgaagctcctctacagagttcagaccacgttcactcagctcctctac
ccggggttttatctttattcaggatcagtgaaactgtcagat
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integrated database retrieval system