Trichomycterus rosablanca: 134326653
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Entry
134326653 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134326653
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134326653
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
DUF4407
U-box
Carbpep_Y_N
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
134326653
NCBI-ProteinID:
XP_062864906
LinkDB
All DBs
Position
14:complement(22024077..22039161)
Genome browser
AA seq
554 aa
AA seq
DB search
MAESKISVAQDEFSCSVCLETLKDPAAIPCGHSFCMVCINNCWDQEDDKGTYSCPQCRKT
FTPRPEVSKNTMLAGVVKKLKKTELQAPHPGHCSTGPEDVDCDFCTERKSKALKSCLVCL
ASFCETHLQPHNQIPVYKTHKLVEASRRLQDQICSQHNKLLEVYCRTDQQCICMLCTMDD
HNGHITISAAAERTEKQKQLLEIQRKFQEKIQNREKELCELIKAVESHKCSAQSAVKNIG
RICTELINLINRRCSELKDLIRDRETAEVSRAEKVLKQVEQQIVELKRKDAELEQLSHTE
DPVHFLQNFQSLSAPAGSAESAAITISPFLSFDDVTKSVSQLREKVEEFWKEQCEKIPDE
VKKVWITPPTELKIRKDFLYYVCRFTLDPNTVNKLLHLSEENKVVTNSGTLQYPDHPDRF
DIYPQVVCRESVSGRCYWEVEWSGDNYVFIAVSYKSISRKGGGGECVFGLNDQSWSLFCS
PSRFSFRHNNKETKIPIMPSSSRIGVYVDYEAGTLSFYSVSDRMKLLHRVQTTFTQLLYP
GFRVHSGSKVKLSD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatccaaaatttcagtagctcaggacgagttcagctgttcagtctgtctggaa
acactgaaggatccagctgctattccatgtggacacagtttctgtatggtgtgtattaat
aactgctgggatcaggaggatgataagggaacatacagctgtccacagtgtagaaaaacc
ttcactccaagacctgaagttagtaaaaacaccatgctggctggagttgtgaagaaactg
aagaaaacagaacttcaagctccacatcctggtcactgttccactggacctgaagatgtg
gattgtgatttttgtacagagagaaaatccaaagcgctaaaatcctgtctggtgtgtttg
gcctctttctgtgaaactcaccttcagcctcacaatcaaattcctgtttataagacgcac
aagctggttgaagcctccagacgactccaggatcagatctgctctcagcacaataaactg
ctggaggtttactgtcgtactgatcagcagtgtatctgcatgttgtgtaccatggatgat
cacaacggacatattacaatatcagctgcagcagagagaactgagaaacagaagcagctg
ctggagatccagagaaaattccaggagaaaatccagaacagagagaaggaactttgtgag
ctaataaaggctgtggagtctcacaagtgttctgcacaatcagcagtgaagaacattggg
aggatctgtactgaactaatcaacttaattaacagaagatgctctgagctaaaagatctg
atcagagatcgagagacagcagaagtaagtcgagctgaaaaagtcctgaagcaggtggag
cagcagattgtagagctgaagaggaaagatgctgaactggaacagctttcacacacagag
gatcctgtccatttcctccagaattttcagtctctctcggctcctgctggatctgcagaa
tcagctgccatcacaatcagtcctttcctctcatttgatgatgttacaaagtctgtatct
cagctgagagagaaagtagaagaattctggaaagagcagtgtgagaagataccagatgaa
gtgaagaaagtctggattactccacctactgagcttaaaatcagaaaagattttctatac
tatgtttgtcggttcacactggatccaaacacagtaaataaactcctccatctgtctgag
gagaacaaagtggtgaccaacagtggaacattacagtatcctgatcatccagatagattt
gatatttaccctcaggttgtgtgtagagagagtgtgagtggacgctgttactgggaggtt
gagtggagtggggataattatgtttttatagcagtgtcatataaaagcatcagcaggaag
ggaggtggtggtgagtgtgtgtttggacttaatgatcagtcctggagtttgttctgttct
ccatccagattttcattcaggcacaataacaaagagactaaaattcccataatgccgagt
tcctctagaataggagtgtatgtggattatgaagcaggaactctgtccttctacagcgtc
tctgatagaatgaagctcctccacagagttcagaccacattcactcagctcctctacccg
gggtttagagttcattcaggatcaaaagtaaaactgtcagattga
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