Trichomycterus rosablanca: 134326728
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Entry
134326728 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134326728
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134326728
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-ANAPC11
Prok-RING_4
zf-RING_6
U-box
Zn_ribbon_SprT
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
134326728
NCBI-ProteinID:
XP_062864974
LinkDB
All DBs
Position
14:complement(33711888..33729221)
Genome browser
AA seq
555 aa
AA seq
DB search
MAESKISVTQDEFSCSVCLETLKDPVTTSCGHSFCMVCINNCWDQEDDKGTYSCPQCRQT
FTPRPVVKRNTMLAGVVEKLKKTELQAPHPGHCSAGPEDVDCDYCTERKSKAVKSCLVCL
ASFCETHLQPHYKSNTFKNHKLVGASRRLQDQICSQHNKLLEVYCRTDQQCICTLCMLEN
HKGHDTISAAAERTEKQKQLLEIQRKFQENIQNREKELCELINAVESHKCSAQTAVEDIE
RICTELINSINRRCSELKDLIRDRETAEVSRAEKLLKQVEQQIVELKRKDAELEQLSHTE
DPVHFLQNFQSLSAPAGSAESAAITISPFLSFDDVTKSVSQLREKVEEFWKDQCEKIPDE
VKKVRITSPPEPEIREDFLQYVCRFTLDPNTVNKNLRLSEENKVVTCSRTLQSYPDHPDR
FDYWSQVVCRESVSGRCYWEVELSGNDGVYIAVSYKSISRKGRGDECVFGCNNQSWSLDC
SSSRFSFLHNNKGTEIPIMPSSSRIGVYVDYEAGTLSFYSVSDTMKLLHRVQTTFTQLLY
PGFRVYYGSEVKLSD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatccaaaatttcagtaactcaggacgagttcagctgttcagtttgtctggaa
acactgaaggatccagtaactacatcatgtggacacagtttctgtatggtgtgtattaat
aactgctgggatcaggaggatgataagggaacatacagctgtccacagtgtagacaaacc
ttcactccaagacctgttgtgaaaagaaacaccatgctggctggagttgtggagaaactg
aagaaaacagaacttcaagctccacatcctggtcactgttctgctggacctgaagatgtg
gattgtgattactgtacagagagaaaatccaaagcagtaaaatcctgtctggtgtgtttg
gcctctttctgtgaaactcaccttcagcctcattataaatctaatacttttaagaatcac
aagctggttggagcctccagacgactccaggatcagatctgctctcagcataataaactg
ctggaggtttactgtcgtactgatcagcagtgtatctgcacgttgtgtatgctagagaat
cataaaggacatgatacaatatcagctgcagcagaaagaactgagaaacagaagcagctg
ctggagatccagagaaaattccaggagaatatccagaacagagagaaggaactttgtgag
ctgataaacgctgtggagtctcacaagtgttctgcacagacagcagtggaggacattgag
aggatctgtactgaactaatcaactcaattaacagaagatgctctgagttaaaagatctg
atcagagatcgagagacagcagaagtaagtcgagctgaaaaactcctgaaacaggtggaa
cagcagattgtagagctgaagaggaaagatgctgaactggaacagctttcacacacagag
gatcccgtccatttcctccagaattttcagtctctctcggctcctgctggatctgcagaa
tcagccgccatcacaatcagtcctttcctctcatttgatgatgttacaaagtctgtatct
cagctgagagagaaagtagaggaattctggaaagatcagtgtgagaagataccagatgaa
gtaaagaaagtccggattacttcacctcctgaacctgaaatcagagaagattttctacaa
tatgtttgtcggttcacactggatccaaacacagtaaataaaaacctccgtctgtctgag
gagaacaaagtggtgacctgcagtagaacattacagtcgtatcctgatcatccagataga
tttgattattggtctcaggttgtgtgtagagagagtgtgagtggacgctgttactgggag
gttgagttgagtgggaatgatggggtttatatagcagtgtcatataaaagcatcagcagg
aagggacgtggtgatgagtgtgtgtttggatgtaataatcagtcctggagtttagactgt
tcttcatccagattttcattcttgcacaataacaaagggactgaaattcccataatgccg
agttcctctagaataggagtgtatgtggattatgaagcaggaactctgtccttctacagc
gtctctgatacaatgaagctcctccacagagttcagaccacgttcactcagctcctctac
ccggggtttagagtttattatggatcagaagtgaaactgtcagattga
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