Trichomycterus rosablanca: 134327007
Help
Entry
134327007 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134327007
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134327007
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-ANAPC11
zf-RING_6
DUF1043
Motif
Other DBs
NCBI-GeneID:
134327007
NCBI-ProteinID:
XP_062865167
LinkDB
All DBs
Position
14:complement(21729579..21757826)
Genome browser
AA seq
550 aa
AA seq
DB search
MADRCISVTQDEFSCSVCLETLKDPVTTNCGHSFCMVCINNCWDQEDDKGTYSCPQCRQT
FIPRPVVRKNIILANIVEDLKKREAQGSIPFGPEDVECDYCTERKSKAVKSCLVCLASFC
ETHLQPHYRIPAYKNHKLVKASRRLQDQICSQHDKLLEVYCRTDQQCICLMCIMEDHSGH
ITISAVAERTEKQKQLLDIQRKFQEKIQNREKELCELINAVESHKCSAQTAVKNIERICT
ELINSINKRCSELKDLIRVRETTEVSRAEKVLKQLEQKNIELKRKNAELKQLSHTEDPVH
FLQNFQSLSAPAGSAESAAIRISPFLSFDDVTKSVSQLRKKVEEFWKDQCEKIPDEVKKV
RITSPPEPKIREDFLQYFCQFTLDPNTVNKNLSLSEENKVVTWSKTLQSYPDHPDRFNIW
PQVVCRESVSGRCYWEVEWSGNYGVCIAVSYKSISRKGGGDECVFGRNVQSWSLFCSPSR
CSFWHNNKKTVIPIMPSSSRIGVYVDYEAGTLSFYSVSDTMKLLHRVQTTFTQLLYPGFY
LNIGSMKLSD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaggtgtatttcagtaactcaggacgagttcagctgttcagtctgtctggaa
acactgaaggatccagtaactacaaactgtggacacagtttctgtatggtgtgtattaat
aactgctgggatcaggaggatgataagggaacatacagctgtccacagtgtagacaaacc
tttattccaagacctgttgtgaggaaaaatattattctggcaaatattgtagaggacctg
aagaagagagaagcccaaggttccattccttttggacctgaagatgtggagtgtgattac
tgtacagagagaaaatccaaagcagtaaaatcctgtctggtgtgtttggcctctttttgt
gaaactcaccttcagcctcattatcgaattcctgcttataagaaccacaagctggttaaa
gcctccagacgactgcaggatcagatctgctctcagcatgataaactgctggaggtttac
tgtcgtactgatcagcagtgtatctgcctgatgtgtattatggaagatcatagcggacat
attacaatatcagctgtagcagaaagaactgagaaacagaagcagctgctggatattcag
agaaaattccaggagaaaatccagaacagagagaaggaactttgtgagctgataaacgct
gtggagtctcacaagtgttctgcacagacagcagtgaagaacattgagaggatctgtact
gaactaatcaactcaattaacaaaagatgctctgagctaaaagatctgatcagagttcga
gagacaacagaagtaagtcgagctgaaaaagtcctgaagcagctagagcagaagaatata
gagctgaagaggaaaaatgctgaactgaaacagctttcacacacagaggatcccgtccat
ttcctccagaattttcagtctctctcggctcctgctggatctgcagaatcagctgccatc
agaatcagtcctttcctctcatttgatgatgttacaaagtctgtatctcagctgagaaag
aaagtagaagaattctggaaagatcagtgtgagaagataccagatgaagtgaagaaagtc
cggattacttcacctcctgaacctaaaatcagagaagattttctgcaatatttttgtcag
ttcacactggatccaaacacagtaaataaaaacctcagtctgtctgaggagaacaaagtg
gtgacctggagtaaaacattacagtcgtatcctgatcatccagatagatttaatatttgg
cctcaggttgtgtgtagagagagtgtgagtggacgctgttactgggaggttgagtggagt
gggaattatggggtttgtatagcagtgtcatataaaagcatcagcaggaagggaggtggt
gatgagtgtgtgtttggacggaatgttcagtcctggagtttgttctgttctccatccaga
tgttcattctggcacaataacaaaaagactgtaattcccataatgccgagttcctctaga
ataggagtgtatgtggattatgaagcaggaactctgtccttctacagcgtctctgataca
atgaagctcctccacagagttcagaccacgttcactcagctcctctacccggggttttat
cttaatataggatcaatgaaactgtcagattga
DBGET
integrated database retrieval system
