Trichomycterus rosablanca: 134334430
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Entry
134334430 CDS
T09921
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134334430
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134334430
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
134334430
NCBI-ProteinID:
XP_062872811
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All DBs
Position
2:47828662..48006612
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AA seq
330 aa
AA seq
DB search
MMLPHSIPAFLYLHEGNQEATNPVDAMAQTFTPAQFPPPPQNGIPGEYTAPHALPTQDYP
GQNRVPEHTLTLYTPTQTHSDPSNNESNTTTIITNTTDDVTQTETLPSLESPEKQQPKRL
HVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADQARDKLNGT
IVEGRKIEVNNATARVMTNKKAVNPYTNGWKLNPVVGAVYGPELYAVTGFPYAATGAAVA
YRGANLRGRGRAVYNTLRTAPPPQPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPATAAA
YSDSYGRVYATADPYTHTISPATAYTVGTM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccctcattccatccctgcgttcctctacctgcatgagggtaaccaagaggca
accaatccagtggacgcgatggctcagaccttcaccccggcacagttccctcctccccca
cagaacggcatcccgggcgaatacacggcaccacatgcccttcctacacaggactaccca
ggacagaaccgggtaccggaacataccctgaccctctacacaccaacacagacacacagc
gacccctccaacaatgaaagcaacacgacaaccatcatcaccaacacgacagatgacgtg
acgcaaacagagacgctgccgtctttagagtcgccggagaagcagcagcccaaacgactc
cacgtctccaacatccccttccgcttccgagacccagacctcagacagatgttcgggcaa
tttgggaagattttagatgtggagatcatttttaacgaacggggatccaagggcttcggc
ttcgtaacgtttgaaacgagtgcggatgcagatcaagcgcgggacaaactaaatggtaca
atcgtagagggacgaaagatcgaggtgaacaacgccacagcgagagtgatgaccaacaag
aaagcagtgaacccatatacaaacggctggaagctgaatcctgtagtaggagccgtttat
ggacctgaactctatgcagtaaccgggtttccatatgcagccaccggggcggcggtagcg
tacagaggagctaatttgagaggaagaggacgagccgtttataacacacttcgtacagct
ccaccccctcaaccaatcccagcctatggagcagtggtgtaccaggacggattctacggt
gctgagatctacggaggctatgcagcgtacagatatgcccagcctgccactgctgctgca
tacagtgacagctatggaagagtctatgcaacggcagacccgtacacccacacgatcagc
ccggccaccgcctataccgtgggcaccatgtaa
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