Trichomycterus rosablanca: 134335861
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Entry
134335861 CDS
T09921
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134335861 (rbfox1)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134335861 (rbfox1)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
134335861
NCBI-ProteinID:
XP_062874537
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All DBs
Position
22:18547198..18850368
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AA seq
389 aa
AA seq
DB search
MKSWQLIAVAGDALQIPGQQMSCDANHLRGNQDAPAPPEPMAQPYPSAQFAPPQNGLPAE
YPASHPHPAPEYPGTSAVPEHTLNMYPAAHTHSEPSADPSAHTVSGTATQTDDAAQTDSQ
QQTQSSESSENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFV
TFESSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYANGWKLNPVVGAVYSP
EFYAVPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPHIPAYGGVVYQDGFYGAD
IYGGYAAYRYAQPATAAAAAYSDSYGRVYAADPYNHALAPAAAYSVGAMNAFAPLTDAKT
RSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcctggcagctgatcgcagtggcgggagatgcccttcagattccaggccaacaa
atgagttgtgacgccaaccatctcaggggtaatcaggacgccccagcccctccagagccc
atggcgcagccgtacccctccgcccagttcgcgccccctcagaacggcctgcccgccgaa
tacccggcctctcacccccacccggcgccggagtacccgggcaccagcgccgtccccgag
cacacgctgaacatgtacccggcggcacacacgcacagcgagcccagcgccgaccccagc
gcacacaccgtctccgggacagccacacagacagacgacgcagcacagacagacagccag
caacagacgcagtcctccgaaagctcggaaaacaagtcgcagccaaaacgactccacgtc
tccaacatccccttcaggtttagagatccagacctcaggcaaatgtttggccaatttggt
aaaatcttagatgttgagatcatttttaatgagagggggtctaagggttttggtttcgta
actttcgaaagtagtgctgatgcggacagggcgagggagaaattacacggcacggtggta
gaaggccgtaaaatagaggtgaataacgcaacggcacgagtaatgacaaacaaaaagaca
gtcaacccatatgcaaacggctggaagttgaatcctgtggttggtgcggtttacagccca
gaattctatgcagtgccaggtttcccatatccggctgccacggcagctgcagcctacaga
ggggcgcacttaagagggagaggacgcaccgtctacaacacgttccgggcagccgctcct
ccaccgcacatcccggcatacggaggcgttgtgtaccaggacggcttttatggtgcagat
atttatggtggttatgctgcctaccgctatgcccagcctgccaccgctgccgctgccgcc
tacagtgacagttacggacgagtttatgctgccgacccctacaaccacgcacttgctcca
gcagccgcatacagcgttggtgccatgaacgctttcgccccgctgaccgacgccaagacc
aggagtcacgcagacgacgtgggtctcgttctttcttcgctgcaggctagtatataccga
ggcggatacagccgcttcgctccatactaa
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