Triplophysa rosa: 130546855
Help
Entry
130546855 CDS
T09216
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130546855
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130546855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
DUF4201
Prok-RING_4
Perilipin
DUF3560
Motif
Other DBs
NCBI-GeneID:
130546855
NCBI-ProteinID:
XP_057178337
LinkDB
All DBs
Position
LG23:8091080..8095395
Genome browser
AA seq
552 aa
AA seq
DB search
MAEGNIPQDKFSCSVCLDLLKDPVTIPCGHSYCMSCITNYWNQDDQRRNYSCPQCRQTFT
SRPALNKNVMFAEMVEELKTRLQTVSDQCYAGPEDVKCDVCTERKYKAVKSCLECLNSYC
QNHLQQHEQFFHVNKHNLMDPTRRLNDMICTKHRKHLEIYCRTDQECICYLCTMDEHKNH
DTVTAVAERTEKLRVLGETQRNFKQRIQEREKKLQELRDAVNSYQRSAQTAVEDSERIFT
ELIRSIERSRSEVTQLIRDQEKTAVSPAEGVLKRLEQEIDDLRRRDTELEQLLHTDNHIH
FLKSFQCLSAPPESTVSHDITVSSLVSFDDVRKSVCQLKEKLEDFCREEIEKISEGVSYI
TIVPDEPKMKEEFLQYFRQFTLDFNTVNEYIRLSDGNTAATNTDTVQQYPDHPDRFNGWR
QVLCSESVCGRCYWEVERSCNVNISVSYKSISRKGQGYECVFGFNDQSWSLICSDSTCSF
WHNNERTGLPVVSSSCRIGVFLDHRAGILSFYGVSDTMTLIHRVQTTFTHPLYPGFTVYD
KSTVKVCRLTKS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagggaatattcctcaagacaagttcagctgttcagtgtgtttggatctactg
aaggatccagtgaccattccctgtggacacagttactgtatgagctgtattacaaactac
tggaatcaggatgatcagaggagaaactacagctgtcctcaatgcagacaaaccttcaca
tcaagacctgctttaaacaaaaatgtgatgtttgctgaaatggtggaagaactgaagacg
agacttcaaactgtttctgatcaatgttacgctggacctgaagatgtgaagtgtgacgtc
tgtactgagagaaaatacaaagctgtcaagtcctgtctggagtgtctgaactcttactgt
caaaatcaccttcaacaacatgaacaattctttcatgtgaacaaacacaacctgatggat
cctactagacgactgaatgacatgatctgcacaaaacatagaaaacatcttgaaatctac
tgtcgcactgaccaggagtgcatttgttatctgtgtacgatggatgaacataaaaatcat
gacactgtaacagctgtagcagaaagaactgagaaactgagagttttgggagagacacag
agaaacttcaagcagagaatccaggagagagagaagaagcttcaggagctcagagacgcc
gtgaactcttaccagcgctctgcacagacagcagtggaggacagtgagagaatctttact
gaactgatccgctccattgagagaagccgctctgaggtgacacaactgatcagagatcag
gaaaagactgcagtgagtccagctgaaggagtcttgaagcgtctggagcaggagatcgat
gatctgaggaggagagacactgaactcgagcagcttttacacacagacaatcacattcat
ttcctgaagagttttcagtgtctgtctgcacctcctgaatctacagtttcacacgacatt
actgtcagttctctcgtctcttttgatgatgtgagaaaatctgtctgtcagctgaaagaa
aaactggaggatttctgtagagaggagatagagaagatatctgaaggagtttcatatatc
acaattgttcctgatgagcccaagatgaaggaggagttcttacaatatttcaggcagttc
acactggattttaacacagtgaatgaatacatccgtctgtctgatggaaacacagcagct
actaacactgatacagtccagcagtatcctgatcatccagacagatttaatgggtggcgg
caggtgttgtgtagtgagagtgtgtgtggacgctgttactgggaggttgagaggagttgt
aatgtgaatatatcagtgtcatataagagcatcagcaggaagggacagggttatgagtgt
gtgtttggatttaatgatcagtcctggagtttgatctgctctgactccacatgctcattc
tggcacaataacgaacgcactggtctccctgtagtgtccagctcctgtagaataggagtg
tttctggatcacagagcaggaattttgtccttctacggcgtctctgacacaatgaccctc
atccacagagtccaaaccacattcactcatcctctctatcctggttttactgtttatgat
aaatccacagtgaaagtgtgtcgtctcacaaaatcatag
DBGET
integrated database retrieval system
