Triplophysa rosa: 130547201
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Entry
130547201 CDS
T09216
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130547201
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130547201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
DUF4201
Perilipin
DUF3560
Motif
Other DBs
NCBI-GeneID:
130547201
NCBI-ProteinID:
XP_057178940
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Position
LG23:complement(8083190..8088122)
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AA seq
488 aa
AA seq
DB search
MNYNLDXAEMVEELKTRLQTVSDQCYAGPEDVKCDVCTERKYKAVKSCLECLNSYCQNHL
QQHEQFFHVNKHNLMDPTRRLNDMICTKHRKHLEIYCRTDQECICYLCTMDEHKNHDTVT
AVAERTEKLRVLGETQRNFKQRIQEREKKLQELRDAVNSYQRSAQTAVEDSERIFTELIR
SIERSRSEVTQLIRDQEKTAVSPAEGVLKRLEQEIDDLRRRDTELEQLLHTDNHIHFLKS
FQCLSAPPESTVSHDITVSSLVSFDDVRKSVCQLKEKLEDFCREEIEKISEGVSYITIVP
DEPKMKEEFLQYFRQFTLDFNTVNEYIRLSDGNTAATNTDTVQQYPDHPDRFNGWRQVLC
SESVCGRCYWEVERSCNVNISVSYKSISRKGQGYECVFGFNDQSWSLICSDSTCSFWHNN
ERTGLPVVSSSCRIGVFLDHRAGILSFYGVSDTMTLIHRVQTTFTHPLYPGFTVYDKSTV
KVCRLTKS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaattataacttagatgangctgaaatggtggaagaactgaagacgagacttcaaact
gtttctgatcaatgttacgctggacctgaagatgtgaagtgtgacgtctgtactgagaga
aaatacaaagctgtcaagtcctgtctggagtgtctgaactcttactgtcaaaatcacctt
caacaacatgaacaattctttcatgtgaacaaacacaacctgatggatcctactagacga
ctgaatgacatgatctgcacaaaacatagaaaacatcttgaaatctactgtcgcactgac
caggagtgcatttgttatctgtgtacgatggatgaacataaaaatcatgacactgtaaca
gctgtagcagaaagaactgagaaactgagagttttgggagagacacagagaaacttcaag
cagagaatccaggagagagagaagaagcttcaggagctcagagacgccgtgaactcttac
cagcgctctgcacagacagcagtggaggacagtgagagaatctttactgaactgatccgc
tccattgagagaagccgctctgaggtgacacaactgatcagagatcaggaaaagactgca
gtgagtccagctgaaggagtcttgaagcgtctggagcaggagatcgatgatctgaggagg
agagacactgaactcgagcagcttttacacacagacaatcacattcatttcctgaagagt
tttcagtgtctgtctgcacctcctgaatctacagtttcacacgacattactgtcagttct
ctcgtctcttttgatgatgtgagaaaatctgtctgtcagctgaaagaaaaactggaggat
ttctgtagagaggagatagagaagatatctgaaggagtttcatatatcacaattgttcct
gatgagcccaagatgaaggaggagttcttacaatatttcaggcagttcacactggatttt
aacacagtgaatgaatacatccgtctgtctgatggaaacacagcagctactaacactgat
acagtccagcagtatcctgatcatccagacagatttaatgggtggcggcaggtgttgtgt
agtgagagtgtgtgtggacgctgttactgggaggttgagaggagttgtaatgtgaatata
tcagtgtcatataagagcatcagcaggaagggacagggttatgagtgtgtgtttggattt
aatgatcagtcctggagtttgatctgctctgactccacatgctcattctggcacaataac
gaacgcactggtctccctgtagtgtccagctcctgtagaataggagtgtttctggatcac
agagcaggaattttgtccttctacggcgtctctgacacaatgaccctcatccacagagtc
caaaccacattcactcatcctctctatcctggttttactgtttatgataaatccacagtg
aaagtgtgtcgtctcacaaaatcatag
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