Triplophysa rosa: 130550143
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Entry
130550143 CDS
T09216
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130550143
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130550143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
SPRY
zf-RING_UBOX
PRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
MYO10_CC
DUF4201
zf-RING_5
Prok-RING_4
HODM_asu-like
Tox-SHH
ANAPC16
Motif
Other DBs
NCBI-GeneID:
130550143
NCBI-ProteinID:
XP_057183512
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MAELISVSEDQFICSICLDLLKDPVTIPCGHSYCMSCITDCWDQDDQKRVYSCPQCRQTF
SPRPVLGKNVLFASMVEKFQIANTVDCNAGPGDVECDVCIGRKRKAVKFCVECLDSYCQN
HLEQHKNLFERKRHKLMDASGKLQERICSQHRKLQDIFCHTDQQCICLLCIMDIHKNHDT
VSAVAERTEKESHLIETQKKYQQRIQEKQKDLQELRDAVVTYKRSAQAAVEDSERIFTEL
IFLIEISCSEMTQLIRDQEKAEVSQAEEILKRLEQEINDLKKRDAEMEQLLHTDDHIHFL
QSFQSLSVPPGSTDSLNITVSSLLSFDEVGKLVSRMREKLENLCTKEIKKTSGRVSNVKI
IGPRSRQEFLQHSFQFTMEQKTAYEYLCLSEGNRVIINNAGTLQLCPDHPDKFNVHPQVL
CRESVCGRCYWEVEWSGRVDISVSYKSISRKGWGDDCFFGRNNQSWSLYCSDSSCSFWHN
NIETELPVVSRSCRIGVYVNHSAGILSFYSVSDTMTLIHRVHITFTQPLYPGFRLDYSAI
LFILSKVKLCEINKVNISESELY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattaatttcagtgtctgaggatcagtttatctgttcaatctgtctggatctc
ctgaaggatccagtgactattccatgtggacacagttactgtatgagctgtatcacagac
tgctgggatcaggatgatcagaagagagtctacagctgccctcagtgcagacagaccttc
agtccaagacctgttttaggtaagaatgtgttgtttgctagtatggtggagaagttccag
attgctaatactgttgactgtaatgctggacctggggatgtggaatgtgacgtttgcatt
gggagaaaacgcaaggctgttaagttctgtgttgaatgtcttgattcttactgtcaaaat
catctggaacaacataaaaatctcttcgaacgtaaaagacacaaactgatggatgcttct
ggaaaactccaagagaggatctgctctcagcatcgtaaactgcaggatattttctgtcat
accgaccagcaatgcatttgtttactctgtattatggatattcacaaaaaccatgacact
gtatccgctgtagcagaacggactgaaaaagagagccatttgatagaaacacagaagaaa
taccagcagagaattcaggagaaacagaaggatcttcaagagctgagagatgctgtagtg
acttataagcgctctgctcaggcagcagtggaggacagtgagaggatctttactgaattg
atctttctcattgagataagttgctctgaaatgacacagctgatcagagatcaggaaaag
gctgaagtgagtcaagctgaagaaatcttgaaacgtctcgagcaggagattaatgatctg
aagaaaagagacgctgagatggagcagcttttacacacagatgatcacatccatttcctc
cagagtttccagtctctctctgttcctcctggatctacagactcacttaacatcactgtc
agttctctcctctcttttgatgaagtaggaaaattggtgtctcgtatgagagagaaattg
gagaatttatgcacaaaagaaataaaaaagacatctggtagagtatcaaatgttaaaata
attgggccccgaagcaggcaggagttcctacagcattcctttcagttcacaatggaacaa
aaaacggcgtatgaatatctctgtctgtctgagggaaacagagtgattattaataacgct
ggcacactgcagctgtgtcctgatcatccggacaaatttaatgttcatcctcaggtgttg
tgtagagagagtgtgtgtggacgctgttactgggaggttgagtggagtggtcgggtggat
atttcagtgtcatataagagcatcagcaggaagggatggggtgatgattgtttttttgga
cgtaataatcagtcctggagtttgtactgctctgattccagttgctcattctggcacaat
aacattgagactgaactccctgtagtgtccagatcttgtagaataggagtgtatgtgaat
cacagtgcaggaattctgtccttctacagcgtctctgacacaatgaccctcatccacaga
gtccacatcacattcactcaacctctctatcctgggtttagattggattattcagccata
ctgtttatattgtcaaaagtaaaactgtgtgaaattaacaaagttaatatttcagaatca
gaattgtactga
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