Triplophysa rosa: 130552698
Help
Entry
130552698 CDS
T09216
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
tros
Triplophysa rosa
Pathway
tros04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130552698 (tp53bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
DUF4537
Motif
Other DBs
NCBI-GeneID:
130552698
NCBI-ProteinID:
XP_057187155
LinkDB
All DBs
Position
LG1:complement(28992039..29009113)
Genome browser
AA seq
1806 aa
AA seq
DB search
MHRQVILYPSHTPSSSRDNRLAQPFIHCCILSEIDKPTVLQRTISQTENPCLIVEDSQPD
SVALEDDPETSYSALLARRLSNLQPTSHSPVLELISSPTKSHLQSGSQINKIDSTTHSAF
FSDNSQSNLGSAATEHSQVFEVCSVPKQKRGVKEHMESETNSTTHGTETRDEMSQFGFLE
LSESQGIHDEEDQLDGAPTKRRDSPNLASQCDLKSSERTSACQDGSSRGSEVSSKSSSGP
QDGESRKLSVQAILHSQVADSQENEDDDIVSSQDDLFDKEQNDIKLDSCAMPTSTPAHSL
RLLHLSGQRILVHESLSQQSVDFVAATQDNLSQAPYIVPNSPTEKDQTAGSPMDTSGPPE
DQHQGREEEPMDMDPCPKPQPTASSPVFQNPPGFVLEKSLSVPSQPEFSHDVFISTPSLE
PGNNSPDTESSKRKLLPQNSQSLTELETPKQTGPPEKVKKPSSSFSQPSEVAECFQLEIS
SENNHSQKTQAFIVEEDSQATQIEEEGTLDVDKSNSDPKCHSQNVSKNGMDPESNKTSQN
SQNKVMDSKNAPEKVENRGSQKFSQSGNVENPNISVTPGVAQSQLSVSAYCVSDTTSVPQ
KSKTTDLPTASSSKTPLSAAEPITCTPVPVPSQSQSLSVLTVSSQKNTENEKEHVESQKL
SQPTIHSHSVITDSVKNTEEEELMDEGEIQSTVKGEESRLDLALSQSQVLSPEPMEEENG
KQEKEKLRDLQSSSKEESFSVVVLEESQRVSQEKVKEKRSQPFVSFSQPTRGSVQEKTAK
MSGSQPLRSTEASPLQLERTKSQSPRAGEAGQRKDQERMNSDNAANKSLSDSSGELPFHF
TLPKEGELIRPAVSATPPQISQLKKTPRHSTPIEMTSFSEPSEGDVTRETTMAASEISVE
ESREGEEPAVMEGDGKLSLRMKLVTPVEEGSSGSEHFSLQKPPLTDEDVSVSKATTVAMA
VTSPSVFSRVREAHRQIHVEDEVESSGLPISRQQSQTLNSPINMNDSGLPPNRPRVTEGN
RSSYRVSEAVSHQSQHPRATNANSEPLLSGLFSPPREGPREEVLITSERPSPCTPVRQRA
VSQQTSVDITSTSSPSGKRAVSQQTSFDLSGPHNLSAKGEQSTPTRTQPGSSMRRHVRTI
QEVRTTVTRIITDVYYEDGREVERKVTHESEEPILDRCVVDNDISPSRTGSSMTSGDLAD
ISSLSSKAPSHHSSSGTSSGGLGPIRMHDFIMPPSRGGKSGSPRWGGRQQPRSHSVAVGS
EVTDTRGSRVKTQLSPRGCARRGRPPSCSPLRRGGRAGLRGGAHGQVASSSEEEPYVQRH
AQAPGSPVELSTTSRSDSLNTTSPDNSTGTSSFVGLRVLAKWSSNSYFYSGSITRDLGEN
RFRLLFDDNQECEVQGKDILLCDPIPLETEVTALTDKEYFNIGMVKGHKTQGSEFLYCVE
KDGQSMWYNRTSVILSMEQGNRLREPYGLGPYEPSTPQTMACDISLDNLVEGKRRRRGNP
SETTTPNRSATNSPRTPGKRKLNSGTEDERTPTKRGRRGGGATVGQKIAACNTSGSGVDL
PPDPDDLVATHGPLPENSSLFMGFVFMLTASSESERDSNHQPSDEDEESVQRAPYNKEYT
MRQLEAGGGMILPDFNEEQCKAAYQSLLIADQHCRTRKYLLCVAGGVPCVSQMWVRDCSQ
EKKLLNYRNYLLPAGLGLEGGIVEWHPRCNPFKALKVLLLLEDRVDLWTSLLSMGGAAKV
HHHKENENISDIPAGKFDLAVAASDAVKPVTPGLPFVSLEWLIQSLICGKCLSFDSNSEF
CHNPST
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtcaagtgatcctgtatccctcacacaccccatcttcatcgcgagataatcgg
ctcgcacaaccatttatacattgctgcattctttcagaaatagacaagcctacggtttta
caaaggaccatttctcagacagagaacccctgcctaatagtcgaggactcccagcctgac
agtgttgccctggaggacgacccagaaaccagctactccgctcttctggcccgtcgcctc
tctaacctccagcctacatctcacagccctgtgttggagctgatttcttcccctactaaa
agtcatttgcaatctggcagtcagattaataaaattgacagtaccacccactcagctttt
ttttcagacaattctcagtccaacttgggttcagcagcaacagagcatagtcaagttttt
gaagtttgctctgttcctaaacaaaaaagaggtgttaaagagcacatggagtccgagact
aattccacaacacatggcacagagacacgtgatgagatgtctcagtttggtttcttggag
ctgtcagagagccagggcatccatgatgaggaagaccagctggatggagctccaaccaaa
cgaagagatagtccgaacctagccagtcaatgtgacttgaagagttcagagagaacatca
gcctgtcaggatggaagttctagagggtcagaggtcagctcaaagagctcttcagggcct
caggatggggaaagcaggaagcttagtgttcaggctatactgcactctcaagtagctgac
agtcaggagaatgaagatgatgacatcgtttcctctcaggatgacctgtttgataaagag
caaaatgacatcaagttagacagctgcgctatgccaacatcaacacctgcacacagtctt
cgcttgcttcacctgtctggccagcgcatacttgtgcatgagagtctttcacagcagtct
gttgactttgtggcggccactcaggacaatttaagtcaagccccttacatagtcccaaat
tcaccaacagaaaaagatcagactgctggatccccaatggacacatctggcccacctgag
gaccagcatcaagggagagaggaggagccaatggacatggacccctgccccaaaccacaa
cccacagcttccagtccagtgttccagaatccccctggatttgttctggagaaaagcctc
tctgtgcccagccagcctgaattctcacatgatgtgtttatttccactccaagccttgaa
cctggcaacaatagtccagatacagagtcttcaaagaggaagctgcttccacaaaacagc
caatcactaactgagttagaaacacccaaacaaactggcccgccagagaaagtaaaaaag
ccttcaagcagcttttcacaaccctcagaggtagctgaatgctttcagttggagatcagc
agtgaaaacaatcattctcagaagactcaggcattcattgttgaagaggatagtcaagcc
acacagattgaagaagaaggaactctggatgtcgacaagagtaattctgaccccaaatgt
cactcccaaaatgtgagcaagaatggtatggacccagaatcaaacaaaacttctcagaat
tcacaaaataaagtgatggattctaaaaatgcacctgaaaaagtggaaaaccgtggctct
caaaagttctcacagtctggtaacgtagaaaacccgaatataagcgttaccccgggtgtc
gctcaatcccagctgtctgttagtgcatactgtgtgtcagacaccacttctgtaccacag
aaaagtaaaaccacagatctgccaaccgccagctcttctaaaaccccactatcagcagct
gaacctataacctgtactcctgttcctgtcccttcacaatctcagtcgttatctgtcctg
actgtttcctctcaaaagaatacagagaatgaaaaagaacacgttgaaagccaaaaactg
agtcagccaacgatacacagccacagtgttattacagacagtgttaaaaatactgaggag
gaggagctgatggatgaaggtgagatacagagtaccgtgaaaggtgaagagagcagactc
gacttggccttgtctcaaagtcaggtgctttctccagaacccatggaggaggagaatgga
aagcaagaaaaagagaagcttagggatctccagtcctccagcaaagaggagagttttagt
gtagtggtgctagaggagagccagagggtctctcaggagaaagtgaaggaaaagaggtcc
cagccattcgtaagcttctctcaacctaccaggggatccgtgcaggagaaaacagccaag
atgtcagggtctcagccactgagatcaactgaggcttcacctttacagcttgagagaact
aagtcacagagcccaagggccggtgaagcaggacagcgcaaagaccaggagagaatgaac
tcggacaatgccgccaacaaaagtctgagcgacagctctggagagcttccgtttcacttt
actttgcccaaagagggcgagttgatccgccctgcagtaagtgcgactcctccacaaatt
agtcagctgaaaaagacaccaaggcacagcactcctattgagatgacctcattctcggag
ccgtcagagggcgacgttaccagggagacgacaatggcggctagtgagatatcggtagag
gagagcagagagggcgaggagccagctgtgatggagggagatgggaaactgagtctgagg
atgaaactggtgaccccagtggaggagggcagctcaggctccgaacatttcagcctgcag
aaaccaccattaacagatgaggacgtctctgtctccaaggctaccactgttgccatggct
gtaaccagtccgtctgtctttagtcgtgtccgggaagcacacaggcagatccatgtggag
gatgaagtagagtccagtggtcttcctatcagcaggcaacagagccaaacgctcaacagc
cccatcaacatgaatgactcaggactgccccccaaccgtccgagagtgacagagggcaat
agatcctcctaccgagtcagtgaagctgtatcacatcagtctcagcatcctcgtgctacg
aatgcaaattctgagcctctgctcagtggtctgttctcccctcccagagaaggtcccaga
gaagaggtcctcattacttcagaaagaccttcaccatgcacacctgttcgccagagagcc
gtgtcccagcaaactagcgtggacatcacctccaccagcagtccttccggcaaaagagct
gtgtctcagcagactagttttgatttgtctggaccacacaacctgtctgcaaagggagag
caaagcacacccaccagaacccaacctggttcatccatgcgccgacatgtccgcaccatc
caggaggtccgcacgactgttactcgcatcattacggatgtctattatgaagacggcaga
gaggttgaacgcaaggttacccatgagtcggaggaacccatcttggaccgctgtgttgtg
gataatgacatctccccatcccgcacaggaagttctatgacatctggagacttggctgat
atcagttcgctctcctcgaaggccccatcacatcacagctccagcgggaccagcagtggg
ggcctggggcccatcagaatgcatgattttattatgccacccagtcgagggggcaagtcc
ggcagtcccaggtgggggggacggcagcagccgaggagccacagtgtggcggtggggtca
gaggtgacggatacacgggggtctcgggtcaagacccagctgagcccccgtggctgtgcc
cggcgaggaaggcctccttcctgcagcccgctgcgtagaggaggcagggcagggctgaga
ggtggcgcccatggccaggtggcatcttcgtcagaggaagagccgtatgtccagcggcat
gcccaagcaccaggcagcccggtagagctgagcactacaagccgctctgattctctcaac
accacctcccctgacaacagtactggcaccagcagttttgttgggttgcgtgtgctggcc
aagtggtcgtccaactcctacttttattctgggagtatcacgcgagacctgggagagaac
cgtttccgccttctgttcgatgacaaccaggagtgtgaggtacaggggaaggacatccta
ctgtgtgatcctattcctctggaaacagaggtcacagcattgactgacaaggagtacttc
aatataggtatggtgaagggccataagactcaaggctctgagttcctgtactgtgtggag
aaagatggccagagtatgtggtacaacagaacatctgtgatcctcagcatggaacaaggc
aaccgcttgagggagccgtatggactggggccctacgaaccatctacaccccaaaccatg
gcatgtgatataagcctagataacctggtagaaggtaaacggcgacgcagagggaacccc
agcgaaacaacgacccctaaccgcagtgcaaccaacagcccgagaaccccagggaagcga
aagcttaacagtggaacggaggatgaaagaacacccacaaaaagaggacgcagggggggc
ggggcaacagtggggcagaagatagctgcttgtaacacatctggaagtggtgttgatttg
ccgcctgaccctgatgacctggtggcgacacacggacctctccctgaaaactcctctctg
ttcatgggcttcgtcttcatgctgacggcgtcctctgaaagtgagagggactccaaccac
cagcccagtgatgaggatgaagaatccgtgcagagagctccatataacaaagaatataca
atgagacagctggaggccggaggaggaatgatcctgcctgactttaatgaagaacagtgt
aaagcagcctatcagagcttgctgatcgccgatcagcactgtcgcaccaggaagtatctg
ctgtgtgtggcaggtggtgttccttgtgtgtctcagatgtgggtgagggactgcagtcag
gagaagaaactcctcaactacaggaactacctgctgcctgccggtctggggctggaggga
ggcattgtggaatggcatcctcgctgtaacccctttaaagccctgaaggtgctgcttcta
ttagaggatcgtgtagatttgtggacctctttgctttccatgggtggtgcagcaaaggtt
catcaccacaaagaaaacgaaaacatttctgacattcctgctggtaagtttgatctggca
gtggctgcatctgatgcagtgaaacccgtgaccccgggcctgcctttcgtctctctggag
tggctcattcagagcttgatctgtggaaagtgcctcagcttcgacagtaattctgaattc
tgtcataatccgtctacataa
DBGET
integrated database retrieval system
