Triplophysa rosa: 130552705
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Entry
130552705 CDS
T09216
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130552705
Membrane trafficking [BR:
tros04131
]
Protein recycling
Others
Others
130552705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130552705
NCBI-ProteinID:
XP_057187174
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Position
LG4:27581806..27732388
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AA seq
1257 aa
AA seq
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MERGSRNHRVNVSAFCALVLLLVWVPGIRTAITCRSCQLFDKWSGRELLVRMDGSISSST
GFVGKVIDNNEDGSTALSNSAGAETGQLATHSDCAADSEKCDHYVRKWNTDLHSNKAVGG
KMPPDGKQGSTDSHGKVSNPERAGLQVVRTGSVPVDLKRRVRRGARGSVMSTDAPRARVF
GNGSVRAARRVPRSELRWNREDRRPATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNS
SVILMLTKLYDFNLGSVTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIML
LTDPEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRR
WQLVHERVAPNRFYWSKLGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGY
IDPNSLVVQDEYVFVQVSTGGRPIYYVSSRRDVFTPMKLPKYTLPKGLHVISTDENRVVA
AVQEWNQNDTFNLYVSESGGVYYALALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKL
NNEVKTYITYNRGRDWRLLQAPSADLRGNSVHCILPYCSLHLHLHVSSNPYTSGNIASRE
SAPGIIVASGSIGAELSSSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPL
PIRHLWLSFDEGRVWNKYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDF
RSIFNRRCVESDYVPWNLHDQREHCLMGVKRVYRNLKAVARCVMGKNYSVTMISEPCDCN
ESDFECDYGFERRSDGKCTPAFWFLPSSMSRSCTTEHTFLNSTGYRKVVSNNCTGGVMEQ
YTARRQVCPSQAPRGLHLVTSEGKLTANHASNVTFLVFLEEGDGSRTSITVDFGDGNAFT
YSNVSSIEDGIKHIYKNVGIYRVSATAENSLGSETVLLFLHVTCQLESIHLSAPFVSVKN
KEVNLTVVLWPSQVGTVTYIWWFGNNSEPVITLEGSVAFTFSREGINVVTVQVSAGNNIL
QDRKTIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIKVSMVQATGVSPEQLLVTV
LPGLPTASEFFLLPDKQLTEGKPDKTSTHLDQLSELVLSALNQNLVQFTLRPGVQITVFA
AHLSAAPLVDTSENHSGSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHVYAAMQDEKEQEM
IQSPVSPTDSTPSCSSQKELLTTLEPLDPEPNTQAIECIKPHPRVKFSSDLPTYMDV
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggaagcagaaaccaccgggttaatgtcagcgctttctgcgccctggtactg
ttgctcgtttgggttccggggatcagaacggcgataacttgcaggtcgtgtcagctgttt
gataagtggagcggtcgggaattactggtgaggatggacggtagcatttcgtcctcaaca
gggtttgtgggtaaagttattgacaataatgaagacgggtcaacggcgctgtctaattcg
gctggtgctgaaaccgggcagctggccacgcatagcgattgcgctgccgatagcgagaaa
tgcgatcactacgtgcgcaaatggaataccgaccttcactcaaataaggcggttggaggc
aaaatgccacccgatggtaaacaggggtccacggacagtcatggcaaagtttcaaacccc
gaacgagcaggtttacaggtcgtgcgcacaggttcggtccctgttgatctcaagcgcaga
gtgcgcagaggcgcacggggatccgtcatgtcaaccgacgcaccccgagcgcgggttttt
gggaacggctccgtgcgggctgcgcgcagagtcccgcgctctgagttgaggtggaacagg
gaagacaggagaccggccacatcgcggcaggaggagctgaaacttaccagctctaccttc
gcgttgacgggggattccgcacacaaccaagccatggtgcactggtccggtcaaaacagc
agcgtgatcctaatgctgaccaaactgtatgacttcaatctgggcagtgtgaccgagagc
tccttatggaggtcaacagactacggtaccacttacgagaagctcaacgagaaggtgggc
gtgaaaaccatcctcagctatctgtacgtcagccccaacaacaagcgcaagatcatgttg
ctgacagacccggaggtggaaagcagtttgctcatcagctcggacgaaggcgccacctat
caaaaatatcgtctcaacttctacatcctcagcctgctgtttcatcccgagcaggaggac
tggatccttgcctacagccatgaccagaagctctacagttcggtcgagttcggccgtcga
tggcagctcgttcacgagcgggtggcgcccaatcgattttactggtctaaactgggcctt
gataaagagccgggcctgatccacctggagaccagtatctcagaaacccaggctctttat
gtcacgtgcaaacttcagaactgcacagatgctaacaagggcaaaccgtttccaggatac
attgaccctaactcgctcgtggtccaagatgagtatgtgtttgtccaggtgtcaaccggt
ggtcgtccaatatactacgtgtcatccagacgggacgtgtttacgcctatgaagcttccc
aaatacacccttccgaagggtctgcatgtgatcagcacggatgagaatcgtgtcgtggcg
gcagttcaggagtggaaccagaatgacacttttaacctttacgtgtcggagtctggaggc
gtctactacgcgctggctttggagaacgtcatgagtagcatgggtcctgagggaaatgtc
atgatagatctatatgaggtggcagggattaaaggaatgttcctggccaataagaagcta
aataatgaggtgaaaacgtatataacgtataacagaggcagagactggaggcttctacag
gccccgtcagctgatctcagaggaaacagcgttcactgcatactgccgtactgctccctg
catcttcacctgcacgtgtcatcgaacccatacacgtccgggaatatagccagcagagag
tcggcacctggaatcatagtggcgtcaggttcaataggtgcagagttatcgagcagcaac
gttagcatgttcatcacatctgacgctggaaacacgtggcgacagatatttgatgaagag
tacagtgtgctttatctagaccagggcggggctttggtggctattagacacacccctctt
cccatcaggcacctctggttgagttttgatgagggaagggtctggaacaaatacagtttc
acctcatcacccctatttgtggatggagtgttgggggaaccaggcgaagagactcttatt
atgacgatcttcgggcacgtcagccatcgctccgaatggcagctggtaaagatagacttc
aggtctatcttcaacagaagatgcgtcgaatctgactatgtgccatggaatttacacgac
cagcgtgaacactgcctcatgggagtgaagagggtctatcgaaatttgaaggccgttgcg
aggtgcgttatgggtaaaaattactccgtcaccatgatttccgagccctgtgactgcaac
gaatccgactttgagtgcgattatggtttcgagagaagatctgacggtaaatgtactcca
gcattctggttcctcccctcctctatgtctcgaagctgcaccaccgaacacacgttcctc
aacagcaccgggtatagaaaggtggtgtccaataactgtacaggcggcgtgatggagcag
tacacagcccgtaggcaagtgtgccccagccaggccccgcgcggccttcatctagtgacc
agtgaagggaagctaaccgctaatcatgctagcaatgtcacctttctcgtcttcttggag
gagggcgatggatcacgaaccagcatcactgtggatttcggagacggaaacgccttcact
tactccaacgtgagctcgatcgaagacgggattaaacacatctacaagaacgtgggaatc
taccgcgtgtcagcaacagctgagaacagtctgggctctgaaaccgttcttcttttcctg
cacgttacgtgtcagctggagtccattcacctctccgccccgtttgtgtctgtgaagaat
aaagaagtcaatctgacggtggttctctggccaagtcaagtgggaacggtcacctatatc
tggtggtttgggaataactctgagcccgtgatcacgctggaggggagcgtggcattcacg
ttctcccgggagggaatcaacgttgtcaccgtacaggtgtctgctgggaacaacatcctg
caagacaggaaaaccatcgctgtccacgaatacttcagatcccaccttctcgctttttca
tccaatcttgacgatcacaaccctgacgtggctgaatggagacttgatgttagtcgagtc
attaaagtctctatggtgcaggcgacaggtgtgagtccagaacagctgttggttactgtt
ctgcccggactgccaacagcgtctgagttcttcctgttaccagacaaacagctgacagag
ggaaagccagacaaaacatctacacatttagaccagctctcagaactggtgctcagtgct
ctgaatcagaatctggttcagttcacactcagaccaggagtccagatcacagtattcgct
gcacatttatcagcagcgcctctagtggacacaagtgagaatcacagtggctcagctatg
ctcatgctcctctctgtggtcgtggtgggtttagctgtgttcctcatctataaattcaaa
aggaagatcccaggcctccacgtctatgcagcgatgcaggatgaaaaagaacaagaaatg
atccagagtccagtgagccccactgacagcacacccagctgcagttcacagaaagagctg
ctcacaacactggagccactggacccagagcccaacacccaggccatcgaatgcatcaaa
cctcatccacgtgtcaaattctcatcagatcttcccacatacatggacgtttga
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