Triplophysa rosa: 130552753
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Entry
130552753 CDS
T09216
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
tros
Triplophysa rosa
Pathway
tros04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130552753 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tros01002
]
130552753 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130552753 (shha)
Peptidases and inhibitors [BR:
tros01002
]
Cysteine peptidases
Family C46: hedgehog family
130552753 (shha)
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Morphogens
130552753 (shha)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
Motif
Other DBs
NCBI-GeneID:
130552753
NCBI-ProteinID:
XP_057187287
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Position
LG1:complement(23734348..23741763)
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AA seq
418 aa
AA seq
DB search
MRLETRVVLVSFLTLSLVMSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFTGSASVTLKDRRQKAVKDLTPGDKVLAADSAGNLVYSDFIM
FTDRDSTTRRVFYVIETKEAAEKITLTAAHLLFVLDNSTEDLHAMTAAFASTVRPGQKVM
VVDDSGQLKSVIVERIYTEERQGSFAPVTAHGTIVVDRVLASCYAVIEDHSLAHWAFAPV
RLYYDVSTVMFPKYFTIQSNATLQQEGVHWYSKLLYKMGTWLLDSHKLHPLGMSVYSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgagacgcgagtagtgctggtgtcttttctcactctgtccttggtgatgtcc
ggactggcctgcggtcctggcagaggctacggcagaagaagacatccgaagaagctgaca
cctctcgcctacaagcagtttatacctaacgtcgcggaaaagaccttaggggccagcggc
agatacgagggcaagataactcgcaattcagagagatttaaagaacttactccaaattac
aatcccgacattatctttaaggatgaggagaacacaggcgcggacagactcatgacacag
agatgcaaagataagctaaattcactggccatctctgtaatgaaccagtggcctggggtt
aagctgcgtgtaactgagggctgggatgaggacggacatcattttgaagaatcactccat
tatgagggaagagctgttgatatcaccacctctgatcgagacaaaagcaaatacgggaca
ctctctcggttagcggtggaggctggatttgactgggtctattacgaatccaaagcccac
atccattgctctgtcaaagcagaaaactcagttgctgctaaatctggaggctgcttcacc
ggttcggcttcggtcacgctgaaagacaggagacagaaggccgtcaaggacctgactccc
ggtgacaaggtgctggcggcggacagcgcgggaaacctcgtgtacagcgacttcatcatg
ttcacagacagagactcgacgacgcgacgtgtgttttacgtcatagaaactaaagaagcc
gctgaaaagatcaccctcaccgcggctcaccttctttttgtcctcgacaattcaacggaa
gatctccacgccatgaccgccgcgtttgccagcactgtcagacctggacaaaaggtgatg
gttgttgatgatagcggtcaacttaaatctgtcatcgtggagcggatatacacggaggag
cgccagggctcgttcgcaccagtgaccgcgcatggaacaattgtggtcgaccgcgtactg
gcgtcctgttacgcggtaatagaggaccacagtctcgcgcactgggccttcgcgccagtc
aggctgtattatgatgtgtcaacagtcatgttccccaaatacttcaccattcagtccaat
gcgacgttacaacaggagggagtccactggtactctaaactcctatataaaatgggaacg
tggcttttggacagccacaagcttcatcctttggggatgtcagtatactcgagctga
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