Triplophysa rosa: 130554575
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Entry
130554575 CDS
T09216
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130554575
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130554575
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
DNA_pol_B
zf-RING_5
UPF0184
DUF4407
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
130554575
NCBI-ProteinID:
XP_057190304
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All DBs
Position
LG5:17796684..17807520
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AA seq
461 aa
AA seq
DB search
MWAPPSLSCLCLDFRKMAEGSFSQDKFSCPVCLDLLKDPVTIPCGHSYCMSCITDCWNRE
DQTGVYSCPQCRHTFTSRPALCKNVMFAELVEHLKKTKLQTTAPVYCYAGPLDVECDVCT
GRKYKAVKSCLECLNSYCQNHLEQHEKLFQGKKHDLMDPNGQLNDMICPKHNKRLEIYCR
TDQQCICYPCLMDEHKTHNTTTAVAERTEKQKLLEETQKKFKRTILESKKKIRGLRMDVE
SYKRSAQTAVKDSERIFTELIRSIERCRSEVTQLIRDQEKAAVTRAEGFLKQLEQEIVDL
RRRNADLEQLSGTANHIHFLQSFQSLSAALESPVSHNITVSPLPSFDDVRKSVSLLKEKL
ENFREEAKKISGKDSRKFITDSNAANRRTARVGGDKMILKAHILLGTPRDHDWSRTRSRM
DGTLLAAPPRTDPERDRKQMKWDPPGTRPRMERGPDYNLYL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgcctccatctttgagctgtttgtgtttagacttccgtaaaatggcagaaggc
agtttttctcaagacaagttcagctgtccagtgtgtttggatctactgaaggatccagtg
accattccatgtggacacagttactgtatgagctgtattacagactgctggaatcgggag
gatcagacgggagtctacagctgccctcagtgcagacacacattcacttcaagaccagct
ttatgtaagaatgtgatgtttgctgaactggtggagcacctgaagaagacaaaactacaa
actactgctcctgtttactgttatgctgggcctttagatgtggagtgtgacgtctgtact
gggagaaaatacaaagctgtcaagtcctgtctggagtgtctgaactcatactgtcaaaat
caccttgaacaacatgaaaaattatttcaaggtaaaaagcacgatttgatggatccaaac
gggcaacttaatgacatgatctgtccaaaacataacaaacggctggaaatctactgccgt
actgaccaacagtgcatttgttatccatgtttgatggatgagcacaaaacccacaacact
acaacagctgtagcagagaggactgagaaacagaaacttttagaagagacacagaaaaaa
ttcaagagaacaatcctggaaagcaaaaagaagattcgggggctaagaatggatgtggag
tcttataagcgctctgcacagacagcagtgaaggacagcgagaggatcttcactgagctg
attcgctccattgagagatgtcgctctgaggtgacacagctgatcagagatcaggaaaag
gctgcagtgactcgagctgaaggattcttaaagcaactggagcaggagattgttgatctg
aggaggagaaatgctgatctggagcagctttcaggcacagccaatcacatccatttcctg
cagagtttccagtctctctctgcagctcttgaatctccagtctcacacaacatcactgtc
agtcctctgccctcttttgatgatgtgagaaaatctgtctctctactgaaagaaaaactg
gagaacttcagagaggaggctaaaaagatatctggaaaggattcccgtaagttcataacg
gattcaaacgcagcgaacaggaggaccgcaagggtgggaggagataagatgattctaaag
gcccacatacttttggggaccccccgtgaccatgactggtccagaactcgatcgcgtatg
gatggaactcttctggcggccccgccacgaacagacccagaacgcgatcgcaaacagatg
aagtgggacccccctggaacgcgaccgcgaatggagcggggcccagactacaatttatac
ttataa
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