Triplophysa rosa: 130555396
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Entry
130555396 CDS
T09216
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tros01002
]
130555396 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130555396 (usp47)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130555396 (usp47)
Peptidases and inhibitors [BR:
tros01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130555396 (usp47)
Ubiquitin system [BR:
tros04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130555396 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
130555396
NCBI-ProteinID:
XP_057191555
LinkDB
All DBs
Position
LG1:33258896..33279951
Genome browser
AA seq
1338 aa
AA seq
DB search
MEMVPSEEKQLVPKEIESAAEEPRVLCIVQDTTNAKTVNERLTLNLPASTTVSKLYEDVA
QKAGYVNGTFCLVWASGINTAPLDQADERSLVLSGFEAGKRNFLQLTDKDGDQPQIASDE
SGTADSSGLDDSSQDRFIGPLPRDGTVGCSSDYSSPSYSYSSILNKSDTGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNTLFKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGY
ESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDAVDEGICLDNASSTERVLKPKSSLTFELFSVMVHSGSA
AGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYML
MYRLKEPSRNAKFLDVEDFPEHIKRLVHREKESEEQEKRQREIDRNTCKIKLFCMHPVKM
MMMENKLEVHKDKTLREATEMAYKLMDVEGVVPLDCCRLVKYDEFHEYLERSYEGEEDMP
MGLLLGGVKSSYMFDLLLEIRRPDQKFQAYKPGEVMVKVHVVDLKSETIAAPVSVRAYLN
QSITEFKQLIAQATGLCAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSDS
TDHQATFTESLLWKLLDRHGNTIRLFVSLPEQSPGCLANRTSCPKASADSEDSFDGATGS
QRPVEAILEESTEKLKNLSLQQTSSTSDSQKSSEHSDFELIDSPAQESEAPSQPPELENQ
FPSDERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADSGPLPLANGLDSHSITSSRRSK
AHEGKKETWDTAEEDSGTDSEYDENGKSKAEAQYLYFKAELYSQEEGSGDGQKCLLVHVD
KRITLAAFKQDLEPYVGVPSTQFKVFRVYANNQEFESVRLNETLSTFSDENKITIRLGRA
LKKGEYRVKVYQLLVNEPEPCKFLLDTVFAKGMTVRQSKEELLPQLKDQCKLELSIDRFR
LRKKTWKNPGTVFLDYHVYEEDINISSNWEVFLEVLEEPERMKSMSQLAVLTRRWCPSQM
KLEPFREVVLESSSVDELKEKLSELSGICLENLEFAKGRGTFPCDISVLEIHQDLDWNPK
VSTLNVWPLYICDDGAVIFYRDNTEELMELSEDERNELMKKESSRLLKTGHRVSYSPRKE
KALKIYLDGGPTKDPGQD
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagaaaagcagcttgtgcccaaagagattgaaagtgctgcg
gaggagccgagagtgttgtgtatcgtgcaggacaccaccaatgccaagacggtcaatgag
aggctgacgctcaacctgcctgcctccaccaccgtcagcaaactgtacgaggatgtggct
caaaaagctggatatgtgaatgggactttttgcctggtgtgggccagcggcatcaatacg
gctcctttggaccaggccgatgagagatccctggttttgtctggttttgaggcaggaaag
aggaacttcctgcagcttacggataaggacggggaccagcctcagatagcttcagatgag
tcaggcacagcggacagcagtggtcttgatgacagctctcaggaccgctttattggaccc
ttgccgcgtgacggtactgtgggatgcagcagtgactacagcagccccagttattcatac
tcatccatactcaacaaatcagacacaggttatgttggtttggtcaaccaagcgatgacc
tgttacctaaacagtcttctgcaaaccttgttcatgacccctgagttcaggaacacactc
tttaaatgggagtttgaggaatctgaggaggatccggtcaccagtatcccataccaactc
cagaggctgtttgtgctcctgcagaccagtaagaaacgcgccattgagaccacagatgta
acgcgcagcttcggctgggacagcagtgaggcctggcagcaacacgacgttcaggagctt
tgcagagtcatgtttgatgcactagagcaaaagtggaaacagactgagcaggctgatttg
ataaaccagctttaccagggaaagctgaaagactatgtgcgctgtttggaatgtggctat
gagagctggagaatcgacacgtacctggacatccccctggtcatcaggcccttcggggcc
agccaggcttttggcagtgtggaagaggctttgcaggccttcatccagcctgagactctg
gacgggcccaatcagtacttctgtgagcgatgcaagaagaaatgcgacgcccgcaagggc
ctgagattccttcattttccgtacctgctgactctgcagctcaagcgctttgacttcgat
tacaccactatgcaccgtattaaactcaacgaccgcatgaccttcccagaggagctggac
atgagtcccttcattgacgtagaggatgagaaatcacctcagacagaaagctgtactgat
agtggcgcggagaatgaaggaagctgccacagtgaccagatgagtaatgatttctccaca
gatgatgctgtggatgagggcatttgtctggataacgccagcagcacagagcgagtgctc
aaaccaaagagctcattgacctttgaactcttctcggtcatggtgcattctgggagcgct
gcaggtggacactactatgcctgcatcaagtctttcagcgacagccagtggtacagcttc
aatgaccagcacgtcagcaagatcacgcaggacgacatccggaagacatatggcgggtcc
tcagggagcagaggctattactctagtgcctttgccagctctacaaatgcatacatgctc
atgtacagactgaaagagccctccaggaatgcaaaattccttgatgtggaggactttccg
gagcacataaagagactagtacatcgagagaaagaatccgaggagcaggagaagagacag
agggagatcgatcgcaacacatgcaagatcaagctcttctgcatgcatccagtgaagatg
atgatgatggagaacaagctagaggttcacaaagacaaaactctcagagaagcaacagaa
atggcctacaagctgatggatgttgaaggagtggtgccgctggactgctgtcgactggtg
aagtacgacgagtttcacgagtatctggaacgttcatacgagggcgaagaagacatgccc
atgggtctgctgctcggcggggtcaaatcttcatacatgtttgacctactgctggagatc
cgcagacctgatcaaaagtttcaggcctacaaacctggagaagtaatggtgaaggtccat
gtggtggatctaaagagcgagaccattgctgcaccagtcagtgtgagggcttatcttaac
cagagcattactgagtttaaacaactcatagcacaggccacggggctttgtgcagaaacg
atgcgtgttgtcttggaacgctgctataatgaccttcggcttctttacgtgcccaacaag
actctgaaagcagagggtttcttcaggagtaacaaggtattcgtggagagctccgactcg
acagatcaccaggccacttttacagaatctcttttgtggaagctcctggatcgtcacgga
aacacaatcagactgtttgtctccctgcctgagcagtccccaggctgtttggccaataga
actagttgccccaaggctagcgctgactctgaggactcgtttgatggagcgacgggcagc
cagaggccagtggaggccattcttgaagaaagcacagagaaactaaagaacctttcattg
cagcagacctccagcaccagtgacagccagaagagctcggaacacagcgactttgagctc
atcgactcaccagcacaagagtccgaggccccctcgcagccccctgagctcgagaaccag
ttcccctcggatgagcgctcggactcggacgtcaacaacgatcgaagcaccagctcggtg
gacagtgacatcctgagctccagccacagcagcgacacgctgtgtaacgcagacagcggc
ccgttgcccctggcgaacggtcttgactcgcacagcatcacaagcagtcgccgctccaaa
gcccacgaggggaagaaggagacgtgggacacggctgaggaggattcgggaacggacagc
gagtacgacgagaacggcaagagcaaagctgaggcccagtacctgtacttcaaagctgag
ctgtactcgcaagaggaaggatccggagacggacagaaatgtttgcttgtccacgtcgat
aagagaatcacattggccgcgttcaaacaggatctagagccgtacgttggcgtcccttcc
actcagtttaaggtcttccgggtttatgccaacaaccaggagtttgagagcgtgcggctg
aacgagactctctctacattctctgatgaaaacaagatcacgatccgattaggacgagcg
ctgaagaaaggagaatacagggtgaaggtctaccagctgctagtcaatgaaccggagccc
tgtaagtttcttctggacacggtgtttgctaagggcatgactgttcgacagtctaaagag
gagttactgcctcaactcaaagaccagtgcaaactggagctcagtatagaccggtttaga
ctcaggaagaagacctggaagaacccaggcacagtgttcctggattaccatgtgtatgag
gaggacatcaacatctctagtaactgggaggtgttcctggaagtccttgaagaacccgag
cggatgaagtccatgtcccaactggcggttctgacacgtcggtggtgtccctcccagatg
aaactcgaaccctttcgggaggtggtgctggagagcagcagtgtggatgaacttaaggag
aagctaagtgaattgagcggaatctgtcttgaaaacctggagttcgcgaaggggagagga
acttttccttgtgacatatcagtgctggagatccatcaggatttggattggaatcctaaa
gtctccaccctcaatgtctggcctctttatatctgtgatgatggcgctgtgatcttctac
agggacaacaccgaggagctaatggagctttccgaggacgagcgcaatgaattaatgaag
aaggagagcagccgcctgctaaagacgggccatcgggtcagctactccccccgcaaagaa
aaggccctcaaaatctacctggacggagggcctaccaaagaccctggacaggactga
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