Triplophysa rosa: 130555447
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Entry
130555447 CDS
T09216
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
tros
Triplophysa rosa
Pathway
tros04145
Phagosome
tros04148
Efferocytosis
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
tros04810
Regulation of actin cytoskeleton
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130555447 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130555447 (itgb5)
04148 Efferocytosis
130555447 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130555447 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130555447 (itgb5)
04810 Regulation of actin cytoskeleton
130555447 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130555447 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130555447 (itgb5)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130555447 (itgb5)
Cell adhesion molecules [BR:
tros04515
]
Integrins
Integrin beta subunits
130555447 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
Integrin_b_cyt
EGF_2
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
130555447
NCBI-ProteinID:
XP_057191648
LinkDB
All DBs
Position
LG6:complement(15346343..15388625)
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AA seq
809 aa
AA seq
DB search
MYEGMMWKLCPFTRHPALLSCIVLEIFIYNVKGLNVCMSGSATSCEECLLIHPSCAWCAQ
EDFGQARTLTSRCDFSQNLLKRGCDAPFIENPKSSKTLLKSKPLSSKQSGSTQYDVVQIY
PQKISLSLRPGDQTSFEVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMRK
LTSNFRLGFGSFVDKNISPFSYTAPKYQDNPCNGYKLFPNCVPTFGFRHLLSLTDKVDRF
NEEVQKQMVSRNRDAPEGGFDAILQAAVCKEKIGWRKEANHLLVFATDDVPHLALDGKLG
GLVHPHDGHCHLNDKNEYSASNIMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNLTA
LIPGTTVEILDQDSKNIIQLIVNAYNNIRSKVELSVWDHPEDLNLAFTATCQDGRPLPGL
RKCADLKIGDTVSFNVTVDARGCPPKGTRKSFIIRPVGFKDRLEVSVDYHCDCSCTHYTT
VNSSLCSSAGTYSCGMCRCEPGYLGAHCECEEGKVDHQHLSACREAEGKQVCSGRGECSC
KQCLCYESEFGKIYGAFCECDDFSCARHRGILCSGHGECHCGECKCHAGYIGDNCNCSTE
STSCVSDDGKMCSGRGNCVCGRCQCSEPGAFGDTCEKCPTCPDACATKRECIECRLFNTG
RLADNQTCQRMCKDEIVIVETLQQDDPNTVQCVYKTENDCVMKFTYSEHPSGLSILTALK
EPECAVAPNAMTVLLAVVGSILLMGIVLLAIWKLVITIHDRREFARFQSARSRARYEMAS
NPVYKQSIPSYPMETVFQMHTKSCNGGVH
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggaatgatgtggaaactttgcccattcacacgtcatccagctcttctatct
tgcatagtcttggaaatatttatttacaatgtcaaaggtcttaatgtgtgtatgagcggt
agtgccacatcttgtgaggaatgtcttctcattcacccgagctgcgcctggtgcgcgcaa
gaggactttggacaagcgagaacactcacctcacgatgtgactttagccagaatttactc
aaaagagggtgtgatgcacctttcatagagaatccgaagagtagcaaaactctcctgaag
agcaaacccctaagttccaagcagtccgggtcgacccagtatgatgtcgtccagatatat
ccacagaagatctctctcagcttaaggcctggtgaccagacctcatttgaggtacaagtg
cgtcctgtggaggactaccctgttgatttgtactatttgatggacctctcgctctccatg
aaggatgatctcgacacaattcgcaacctgggcaccaaactggcggaagaaatgaggaaa
ctcacaagtaacttccgtcttgggttcggctcttttgtggataagaacatatcacccttc
tcctacacagcccccaagtaccaggacaacccttgcaatggatacaaattgttcccgaac
tgtgtccccacgtttggtttccgtcacctcttgtctcttacggacaaagtggatcgtttc
aatgaagaagtgcaaaagcagatggtttcacgaaacagggacgcgccggaggggggtttt
gatgccattctgcaggctgctgtgtgtaaggagaagattggctggaggaaggaggcaaat
catcttctggtgtttgccactgatgatgtcccacacttggctttggacggaaagctcggt
ggactcgtgcatcctcatgatggacattgtcacctgaatgacaagaacgagtacagcgct
tcaaacataatggactacccgtctctagctctactgggagaaaaactggcagaaaataac
attttcctcatctttgcagtgaccaaaagacactatgttctttacaagaacctaactgct
ttgatccctgggacgacagtggaaattttggaccaagactctaaaaatattattcagcta
attgtcaatgcatacaataacatcaggtcaaaagtagagctgagcgtttgggatcatcct
gaagatcttaatctggccttcactgccacctgccaagacgggcgtcccctacctggcctc
cgcaagtgtgctgacctcaagattggtgacactgtctccttcaacgtcactgtcgatgcc
cgaggatgccccccaaaaggtacccggaagagtttcatcatcaggccagttggcttcaaa
gaccgtctggaggtctctgtggattaccattgcgactgcagctgcacgcattacacaacg
gtcaacagtagcctctgcagctccgccggcacctacagctgcgggatgtgccgctgcgag
cccggctacctcggagcacactgcgaatgtgaggagggcaaggtcgaccaccagcacctc
agcgcctgccgtgaagccgagggcaagcaggtgtgcagcggccggggagagtgcagctgt
aagcagtgcctgtgctacgagtcagagtttggcaaaatctacggagccttctgcgaatgt
gatgacttctcctgtgcccggcacaggggtatactgtgctcaggtcatggagaatgccat
tgcggtgagtgtaaatgccacgctggttacattggagacaactgtaactgttccacagaa
tcgacttcctgcgtgtctgacgatggaaagatgtgcagtgggcggggcaactgcgtatgt
gggcggtgccagtgcagtgagccaggggcatttggggacacatgcgagaaatgtccaact
tgtccagatgcctgtgcaacaaagagggaatgtatcgagtgccgtctttttaacacggga
agactcgccgataaccagacctgtcagcgcatgtgcaaggatgagatcgtcatagtggaa
acactccaacaggatgatccaaatactgttcaatgtgtatataagactgagaatgactgc
gtcatgaagtttacatactctgaacatcccagtggcctgtcaatcttaaccgctcttaaa
gagccagagtgtgctgttgccccgaatgccatgacagtgctcttggcagttgttggcagc
atcctgttgatggggatcgtgctgttagccatctggaagctggtcatcaccatccacgac
cgccgcgagtttgcacgtttccaaagtgcacgttcacgagcacgatatgagatggcatct
aatcctgtttataagcagtctatcccatcttacccaatggagacagttttccagatgcat
accaagtcatgcaatggaggagtccactaa
DBGET
integrated database retrieval system