Triplophysa rosa: 130557142
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Entry
130557142 CDS
T09216
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tros
Triplophysa rosa
Pathway
tros04217
Necroptosis
tros04622
RIG-I-like receptor signaling pathway
tros04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130557142 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130557142 (cylda)
04625 C-type lectin receptor signaling pathway
130557142 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tros01002
]
130557142 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130557142 (cylda)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130557142 (cylda)
Peptidases and inhibitors [BR:
tros01002
]
Cysteine peptidases
Family C67
130557142 (cylda)
Ubiquitin system [BR:
tros04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130557142 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
130557142
NCBI-ProteinID:
XP_057194683
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All DBs
Position
LG1:complement(21685754..21706981)
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AA seq
951 aa
AA seq
DB search
MSSTLWSQEKPAGFRDDWRFYIVVKECTVEKPGQKTLRIARGSLGQACQERNSLGRTIPP
GKGKRSLRILDQTNVVVSVDERDVMELEEKLAELLFPITNCEERYSLLYNRARLDRARDI
NCGSKVRVQLRSGDEPLPGVVRFKGALLPDPALSGIWFGVELLEEGRGQGFTEGSYQGQQ
LFRCEDECGVFVALDKLELWEDEELEVDRVTLVDNEPEVEGDVPPLEINSRVLVQTRDGP
ERGTVIFCDLLPGNESLGYYVGVDMDNPIGDWDGIIDGKLLCNFASLEHTRLVPICDVMP
EYSMQDQRQAKAIGCRSGSEKSGSQSKPKSKGLGLQPGNRSKSEFYYTLNGSSVDHPSQS
KAKSTWYIDEVGEDPAKSLTDMPPDFNQASSPSRAPPTTSSLSSDNKFHSLPFSLSRKVG
PNGSMNHGPLSLSAGSVMGEQQEILPPATTPVQRPLSPLQGQPGLEVGSMVEVKENPPLC
GVIRWVGLPPGLQEPLAGLELEEECVGCTDGTFKGIRYFTCPPKKALFVKLKCCRPDSRF
PSLHHSPNPIERCNSIAFGGYLSEVVNENTPPRTENDGLEVMVGKKKGIQGHYNSCYLDS
TLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQELLRTEIVNPLRIHGYVCATKIMKLRRI
LEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKKDKV
LVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLDDTP
RECRICGGLALYECRECYDDSDITPGKIKQFCDKCNTQVHLHPRRKSHRYVKLSVPKELQ
ESVWRQGFYPHQQMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFNIPQ
VSPCPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaacactgtggagtcaggagaagccggcaggttttcgggatgactggcgcttc
tacatcgtggtgaaggaatgcaccgtagaaaagccgggccagaagaccctgcgcattgca
cggggaagcctcggccaggcctgtcaggagcgcaacagcctcggccgcaccattcctccc
ggtaagggtaaacgcagcctgcgcatcctggaccagacgaatgtggtggtgagcgtggat
gagcgagacgtaatggagctggaggagaagctcgccgagctgctgttccccatcaccaac
tgcgaagagcgctacagccttctgtacaacagagcgcgtctggacagggcccgtgacatc
aactgcggatccaaagtcagagtgcagctgaggtctggcgacgagccccttccaggtgtt
gtccgctttaaaggagctttgcttcctgacccagcactgagtggaatctggtttggtgtt
gaattgctggaggagggccggggtcagggtttcacagagggctcttatcagggtcagcag
ttgtttcgctgtgaagatgaatgcggggtgttcgttgcactggataaacttgagctgtgg
gaagatgaagagctggaggtggatcgggtgactctggtggataatgaaccagaagttgaa
ggagatgtcccaccactggaaattaactctcgggtattggtgcagacgcgggatggccca
gaacggggcactgtaatcttctgtgatttattgcctggcaacgagagtcttggctactat
gtcggtgtcgatatggacaatcccattggagactgggatgggatcatcgatggtaaactg
ctgtgtaattttgctagtcttgaacacacccgtctcgtccccatctgtgatgtgatgcca
gaatactccatgcaggatcagaggcaggccaaagccattggctgcaggagtggcagtgaa
aagtctggcagccagagcaaaccaaagagcaaagggctaggcctgcagcctggcaacagg
agcaagtctgagttttattatactctaaatggcagctcggtcgatcacccttcccagtcc
aaagccaaaagcacatggtacatagatgaagtcggcgaagatccggccaaatctttgaca
gacatgcctccagacttcaaccaggcctcatccccttctcgggctccacccacaacctcc
tcgctgtccagtgataacaagttccactccctgcccttcagcttgagccgcaaagttggc
ccaaatgggagcatgaaccatggccctctctctctgtctgccggctctgtgatgggcgag
cagcaggaaatcctgccacctgcaacaacacctgtccagaggccactgtcaccactgcaa
ggtcagccagggttagaggtcgggtcaatggtggaggtcaaagagaacccaccactgtgt
ggggtcattcggtgggttggcctgcctccagggctgcaggagccacttgctgggctagag
ctggaggaggagtgtgtgggctgcactgacggcacatttaaagggattcgttatttcacg
tgtccacctaagaaagctctgtttgtcaaactgaagtgctgccggcctgactcacggttt
ccatccttacatcattcacccaaccccatagaacggtgcaactccatagcatttggtggt
tacctgagtgaagtagttaatgagaacactcctcctcggacggagaatgatggcttagag
gtgatggtggggaagaagaaaggaattcaaggacattataactcctgctatctggactcc
actctgttttgtcttttctcctttagttctgtgttggatacggtgctcctgaggcccagg
tccaagacagatgtagaatattacaaagagacacaagagttactgcgaacagaaatcgtc
aacccactgcggatacatgggtacgtgtgtgccacaaaaatcatgaaactcagaaggata
ttggagaaagtggaagcagcatcaggattcacttcagaagagaaggatcctgaggagttt
ctcaacatcctatttcatcacatcttgagagttgaccctcttctcaaactacgatctgcc
ggacagaaggtgcaggactgttacttctatcaaatctttatggacaagaaagataaagtg
ctggtgccaaccagccagcagcttctggagtggtctttcatcaacagtgacctcaaattt
gcagaggccccatcttgccttataatccagatgcctcgctttgggaaggactttaagatg
tttaataaaatcttcccttctctggagcttgacatcacagatctattagatgacactcct
agagaatgtcgaatctgtggtggcttagctctatatgagtgcagagagtgctatgatgac
agtgacattacaccaggaaagattaagcagttctgtgacaagtgcaacacacaggtacat
ctgcatccacggcgtaagtctcatcggtatgttaagttatctgtacccaaagaactgcag
gagtcagtgtggagacagggtttttaccctcaccagcagatggagctgttcgccgtgctc
tgcatcgagacaagccactatgtcgccttcgtcaaatacggatctgcagactctgcctgg
ctcttctttgacagtatggctgaccgtgatggtggtcagaacgggtttaacataccacag
gtatccccgtgcccagaagtaggagcctacctgaagatgacccctgaggagctccacgcg
ttagaccccaagaacatccagggctatgcccgcagacttctctgtgatgcctatatgtgc
atgtaccagagtccaactatgagcctctataaatag
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