Triplophysa rosa: 130560123
Help
Entry
130560123 CDS
T09216
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
tros
Triplophysa rosa
Pathway
tros04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130560123 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
130560123
NCBI-ProteinID:
XP_057199611
LinkDB
All DBs
Position
LG1:complement(23417776..23511074)
Genome browser
AA seq
1872 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLAAVPDEIYRYSRSLEELLLDANQLRELPKPFFRLSN
LRKLGLSDNEIQKLPPDVANFIQLVELDISRNDISEIPENIKFCQALEIADFSGNPLSRL
PDGFSQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPTSLSLLVKLEQLD
LGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPKEIS
GLIALTDLLLSENLLEVLPDSISSLKKLSILKVNQNRLVHLTDSIGECVNLTELMLTENL
LQSLPRSLGKLKKLTNLNVDRNRLNSVPSELGGCVSLNVLSLRDNRLGKLPAELANATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
SSSLENLLDRSADETWPTDSNLNRVSVIQFRDDAKNEEEDEETAAERRQGLQRRATPHPS
ELKVMKNVIEARRNEPYVAKPDGELESPESEEKRLSGLSNQSHDSQASSSTASATSQDEK
RGVNRTGVVPKDVQAQEEEELDEMEVEYTEPTVHFADEPIIRGGDDENDDEDDADRSDED
SRTPPPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDGLSPPAHTPEDERDG
EEDEEEEEDGGVTVSTPLLHRLEAVELEDSRLSHVNSSLQPVKGVSFDQVNNLLIEPARI
EEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLE
VNGVDLHGAEHHTAVEALRNSGTAVVMTVLRERMVEPENAITTTPLRPEDDYFPRERRSS
GLPFLLEPESPAVNTGPCQRLATCLIRNDKGLGFSIAGGKGSTPYRVGDTGIFISRIAEG
GAAHRDNILHVGDRVISINGVDMTEARHDQAVALLTGTSPTITLVVDREQASAGGASPRT
RPHSPPPPEPSDSPEQEEGGDEPLGNHLNCPMEDEYPIEEVTLVKAGGPLGLSIVGGSDH
ASHPFGVNEPGVFISKVIPNGLASQSGLRVGDRILEVNSIDLRHATHQEAVRSLLANKQE
IRMLVRRDPSPPGMQEIVITKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGA
AARDGRLLVGMRILEVGNNSLLGMTHTEAVRVLRAAGDSLVVLVCDGFDPRNAAGMEASP
GVIANPFAAGIVRKNSMESISSVDRDLSPEEIDIMQKEVEMARETSQWEREDMENVERMR
LEREEATRLLEEETENLSTGPLKLDYKTLAALPTTSLQKVNRASPSEPLRIDSPVRDIAH
SPYNSQTKPGAIQPLSRVRPPASPVSQDGHSSPNPFQHGLSPINSQTTPRAPSPDTFEGL
NIKQVYKAFAAVPHSLAVLEPPQDLYAQRNNVNAKQTSPELNNEVFEDDGGVPLTPRPSL
TSDRLEYRSLAAVPRLSRPSVEQKTPPTLGRGTPEQRSFRDRQKYFEIDVKQQTPDNKPK
PRVSLVGEDDLKKMKEEEAKRIEHSSQEYMLDEDEEEDEEDLAKQVADMKAHGKVILDGV
EYKVESIGSRGSSSPMHCATPPSYYATPPSSGPSSVDGKGDFQRNSVEDSFRLEQRPNSM
TSLIPVYPGESGAPIRTAKAERRHQERLRMQSPELAVAMDKELSPAEKRALEAEKRAMWR
AARPYGLEEDVRQYEQDLAKRLYQSRVRASLGSAAAPPTSCSSSSCQPRMKSLEQDALKA
QMVIAKSKEGKKRGALDQLSESPSPVPTPSPTPMDDLSPRTVTSPGRLSLSEKKFDYRQF
AAIPSSKPVYDIQSPGVTDDVRFMDDVSSNPVSVLDTDVPMATTSALEEMALYSNKRKLR
QGRRSLEAPVPT
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgctgtggcggtgcaaccgtcacgttgagtccgtggataagcgg
cactgctcgctcgccgcggtgccggatgagatctaccgctacagccgcagtctggaggag
ctgcttctggacgcaaaccaactgagagagctgcctaagcctttcttcagactgtccaat
ctgcgcaagttgggcctgagcgacaacgagattcagaaactgccgcctgacgtggccaac
tttattcagctggtggagctggacatctctagaaatgatatttcagagatccctgagaac
attaaattctgtcaggccttggagattgcagacttcagcggaaaccccttgtccaggttg
cctgatggtttctcacagctcagaggactggctcacctgtcactcaatgacgtgtcattg
cagtctctacccaatgacattggaaatttgtccaacctggtgactctagagctgagggaa
aatctactgaaatctttacccacctctctttccttactggttaaactggaacagctggat
ctaggcagcaatgtactggaagttttgcctgacacacttggggcactgcccaatcttcgt
gagctttggttggacagaaaccagctctcctcactacctcccgagctggggaacctgcgg
cagctggtttgcttggacgtgtcagagaaccgtctatcagagcttcccaaagagatcagc
ggccttatcgccctcacagacctgctgctctccgagaaccttctggaagtcttgccggat
agcattagctcacttaagaagctgtccatactgaaagtgaaccagaaccgcttggtgcat
ctcacagactccatcggcgagtgtgtgaaccttacagagctcatgttgactgagaacctt
ctacagtctctgcctcgctctcttggaaagcttaagaagttgacaaacttgaatgtagac
cgaaaccgtttaaacagcgtgccgtcagaactgggaggatgtgtcagcctgaatgtgctc
tccctcagagacaaccgattgggtaaactgcctgctgagctcgccaatgccacagaatta
cacgtgctggatgtggcaggcaacagactgcagaacttgccgtttgcattggccaacctg
aacctgaaggccatgtggctggcagagaaccagtctcagcccatgctgaagttccagacg
gaggatgatgagcagactggggaaaaggtcctcacctgttacctactgccccagcaaccc
tcatccagtctcgagaatctgctagaccgtagcgctgatgagacctggccaacagactct
aatctgaaccgagtatcagtcatacagtttagagatgatgctaaaaatgaagaggaagat
gaggagactgcagcagagaggaggcagggtcttcagaggagagccacaccacatcccagt
gagttaaaggtgatgaagaatgttattgaagccagaagaaatgagccttatgtagccaag
ccagatggagagctggagtccccagaatcagaggaaaagcggttaagtgggctgtccaat
caaagtcatgattctcaggcatccagtagcaccgcctcagcaacttctcaggatgagaag
cggggagtaaaccgcacaggggtggtgcctaaagatgtacaagctcaagaggaggaggag
cttgatgagatggaggtggagtatactgagcccaccgtgcactttgccgatgagcccatc
atccgtggtggcgatgatgagaacgacgacgaagacgacgctgaccggagcgacgaggac
tcccgaacgcccccccctacagagaaacagcggctgatacgtaaagacacaccacactac
aaaaagcacttcaagatcaccaagctgcccaaacccgaggctgtcgccgcccttctgcaa
ggtttcagcccggacggcctctcacctcctgctcacactcctgaggatgagagagatggt
gaggaggatgaagaagaggaggaagatggaggagttacagtcagtactcccttactgcac
agactagaagcagttgagctagaagacagcaggctaagtcatgtgaactcgtccctgcag
ccggtgaagggggtgtcatttgatcaagtcaataatctgctgattgagcctgctcgaatt
gaggaggaagagctgacactgaccatcctgaggcagactggtggcttaggcatcagtatt
gcaggagggaaaggatctacaccttacaagggtgacgatgagggtatcttcatctccaga
gtttcagaagagggtcctgcagcccgggctggagtcaaagtgggagacaaactccttgag
gtaaacggagtggacctgcacggagcagagcatcatacagctgtcgaggccttgcgtaac
tctgggacagctgtggttatgaccgtcctgcgggaacgcatggtggaaccggagaacgcc
atcaccaccacaccgctacgaccggaggatgattacttcccccgggagagacggtccagc
ggtctaccttttctcctggagccggaatcaccggctgttaacaccggaccctgtcagcga
ctagccacctgtctgatccgcaacgataaaggtttaggattcagtatcgccggagggaaa
gggtcaacaccgtaccgagtaggagacacgggaatcttcatctcccgaattgctgaagga
ggagctgctcaccgagacaacatcctacacgtgggagacagggtcatatcaatcaatggt
gtagacatgacagaggccaggcatgaccaggcagtagcgctgcttaccggcacctccccc
accatcaccctagtggtcgatcgggagcaggccagtgcagggggtgcctcccctcgaaca
cggcctcattccccccctccccccgagccttctgactcacctgagcaagaggagggagga
gacgagcccctcggaaaccatctaaactgccccatggaggatgagtaccccattgaggaa
gtgaccctggtcaaagcaggtggtcctctgggtttgagtattgtggggggtagcgaccat
gccagccacccctttggagtcaatgagccgggagtgttcatatcaaaggttattcctaat
gggttggcctctcagagtgggctgcgtgtaggtgatcgtatcttggaggtaaactccatt
gacctgcgacatgccacgcaccaggaagccgtcagatccctgctcgccaacaagcaggag
atccgcatgctagtgcgcagagatccctcaccacctggcatgcaggagattgtcattacc
aagcagcctggagaaaagctgggcatcagcattaggggcggagctaaaggccatgcgggt
aacccctttgaccccacagatgaaggcatcttcatttccaaggtgagctccagtggagca
gcagcgcgagatgggcgtctgctggtgggcatgcgtattctcgaggttggcaacaacagt
ctgctgggaatgacgcacacggaagcagtgagagtcttgcgtgctgccggtgattccctg
gtcgtgcttgtatgtgatggctttgatccaagaaacgctgctggcatggaggcatcccct
ggtgttattgcaaacccttttgcggccggtattgtgcgtaagaacagtatggaaagcatc
tcatcagttgacagagacctgagtcctgaagaaattgacattatgcaaaaggaggtggaa
atggcgagggagacgtcacagtgggaacgggaggacatggagaatgtcgagcgtatgcgt
ttggagcgcgaggaggcaactcgcttgctggaggaggaaactgagaatttgagcactgga
ccattaaaactggactacaagacactggcagcactacctacaaccagtctacagaaagtt
aatagagcttccccctctgagcccctccggattgacagtcctgtccgtgatatagcacat
tcgccatacaactcacagactaaaccaggtgccatccagcctctgtctcgggttcgaccc
cctgcgtctccagtcagtcaggatggccacagcagtcccaatcctttccagcatggcctc
tctcccatcaactctcagaccactcctcgtgccccatcccctgacacatttgagggattg
aatatcaagcaggtatataaggccttcgcagctgtgccacactccctggccgtactggaa
cccccgcaggatttgtatgctcagagaaacaacgtcaatgcaaaacaaacatctccagag
ttgaataatgaggtgtttgaggatgatggtggtgttcctctcacccctcgtccctccctc
acctctgatcgcctcgagtacaggagcctggcagccgtgccgcgcctgtctcgcccctca
gtggagcagaagacacctcccactttgggcagaggcaccccagaacagcgctccttcaga
gacagacagaagtatttcgagattgacgtgaagcagcagactccagacaacaaacccaaa
cctcgcgtctcactggtgggagaagatgacttgaagaaaatgaaagaggaagaagctaag
cgaattgaacacagttcacaagagtatatgctggatgaagatgaggaggaggatgaggaa
gatctggccaagcaggtggcagatatgaaggctcatggaaaggttattctggatggtgtg
gagtacaaagtcgagagcataggaagccgcggttcatcgtctccgatgcactgtgccaca
ccgccgagctattacgcgacacctcccagctcaggtccttcctctgtcgatggtaaagga
gacttccagcgaaattctgtggaagacagttttagattggagcagagacctaattccatg
actagtttgatcccagtttaccctggcgaatctggggcccccattcggacggcaaaggca
gagcgcagacatcaagagcgcctgcgcatgcaaagccccgagcttgccgttgctatggac
aaggaactatcacctgctgaaaaacgagccctggaggcagagaagagagccatgtggaga
gctgccaggccttatggtctagaggaggacgtaaggcagtatgagcaagacctggctaag
cggctctaccaatcccgtgtgagggcatcactaggcagtgctgcagcccctcccacttcc
tgctcctcctcttcctgtcagcccaggatgaagtctttagagcaagatgctttgaaggct
cagatggtcattgccaagtctaaagaggggaagaagcgtggagccctggatcaactgtca
gagtcgccgtctcctgtccccacaccctctcctacacccatggacgatctcagtccacgg
acagtaacttcaccaggcagactgtccctgtcagaaaagaagtttgactaccgacaattc
gctgccattccttcttccaaacccgtttacgacattcagtctcctggtgtaacagatgac
gtgcgtttcatggatgatgtctccagtaatccagtgtctgttttagatacagacgttccc
atggccaccacatctgctctagaggagatggctctctacagtaataagcgcaaactacga
cagggtcgccgcagcctggaggcgccagtgcccacataa
DBGET
integrated database retrieval system
