Triplophysa rosa: 130560654
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Entry
130560654 CDS
T09216
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
tros
Triplophysa rosa
Pathway
tros03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130560654 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130560654 (pcgf5a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
130560654 (pcgf5a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-Nse
zf-C3HC4_3
zf-RING_10
zf-RING_6
zf-rbx1
E3_UbLigase_R4
Etmic-2
DUF1272
zf-C3HC4_5
zf-RING_16
TRAF3_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130560654
NCBI-ProteinID:
XP_057200587
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Position
LG10:18013206..18021145
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AA seq
237 aa
AA seq
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MATQRKHLVRDFNRHITCSICRGYLIKPTAVTECLHTFCKSCIVQHFEESNECPECGIQV
HETNPLEMLRLDKTLEEIIFKLVPGLRDKEEQQESEFWRKNKLKSNGEDGPRAKKPCLSD
EEEDDGKGGDYHRSDPQIAICLDCLRNNGQSGESIVKGLMKKFIRCSTRVTVGTIKKFLC
VKLKMPSSYELDVLCNGEIMGKDHTLEFIYRTRWRLQGESVSAYPMVLEYRPRIDFG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccagcgaaagcacctggtccgtgatttcaaccggcacatcacctgctcaatt
tgccgtggatatttgatcaagcccactgctgtcacagaatgcctgcacaccttttgtaag
agttgtattgttcagcattttgaagagagcaatgaatgcccggagtgtggaatacaggtc
catgaaaccaaccccttagagatgctgagactagataaaaccttagaagagattatcttc
aagctggtgcctggactaagagacaaggaagaacaacaggaaagtgagttttggagaaaa
aataaactcaaatcaaatggagaagatggcccaagggctaagaaaccttgcttgagcgat
gaagaggaagatgatggaaagggtggagactaccacagaagtgatcctcagatcgctatt
tgtctggactgtctacgaaacaatggccagtctggagaaagcatagtaaagggtttaatg
aagaaattcatccgttgctccactcgtgttacagtgggaaccattaagaagttcctctgt
gtaaaattgaagatgccaagctcttatgagctcgacgttctatgtaatggcgagatcatg
ggcaaagaccacaccctggaattcatctaccgcactcgatggagactacagggagaaagc
gtaagtgcttatcccatggtcctcgaataccgtccacggatcgacttcggttaa
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