Triplophysa rosa: 130563834
Help
Entry
130563834 CDS
T09216
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
tros
Triplophysa rosa
Pathway
tros04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130563834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130563834
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130563834
Spliceosome [BR:
tros03041
]
Complex C
Other components
Complex C specific factors
130563834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
130563834
NCBI-ProteinID:
XP_057205602
LinkDB
All DBs
Position
LG13:complement(20196511..20203198)
Genome browser
AA seq
610 aa
AA seq
DB search
MDATKRSYTEDRSGSEGSEDDDYVPYVPVKIRKQHVLQKVMRLRGKGLTDEEQKDSGGEQ
KDEDEGLGPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEM
AKGITYEDPIKTSWKAPRYILTMQPARHERVRKKYHILVEGDGIPPPIKSFREMKLPQAI
LKGLKKKGIIHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPITMFCLEQEKRLPF
CKNEGPYGLIICPSRELARQTHTIIEYYCKLLEDEGAPQLRCALCIGGMSVKEQMEVVKR
GVHMMVATPGRLMDLLNKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTL
LFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTT
PPVLLFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKGGKKDVLVATDVA
SKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDLKALL
VEAKQKVPPVLQVLQMGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTNIGRK
DYLANSSMDF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacaaagagaagctacaccgaggacaggtctggatcggagggatctgaggat
gatgactatgtgccatatgtccccgttaagatccgaaaacagcatgtgttacagaaggtg
atgcgactgcgtggaaaagggctcacggatgaggaacagaaagacagtgggggagagcag
aaagatgaggatgaaggtcttggcccacgatcaaacgtcagtctgctggaccagcatcaa
cacctcaaggaaaaagctgaagcccgtaaggagtccgctaaggagaagcagttgaaagaa
gaagaaaagattctggagagcgtggctgaaggcagagctttgatgtctgtgaaggaaatg
gccaaaggtatcacatacgaagaccctattaaaacaagttggaaagcaccacgttacatt
ctgaccatgcaaccggcacgccacgaacgagttcggaagaagtaccatattcttgtggag
ggtgacggcattccacctcccatcaagagctttagagagatgaagcttcctcaggccatt
ctgaaaggtctgaagaagaaaggaatcattcacccgacacccattcagattcagggaata
ccaaccattctctcaggccgagacatgattggtatcgccttcaccggctcaggaaagacc
cttgtgttcacgctgcccatcaccatgttctgtctggagcaggagaaaagattgcctttc
tgtaagaacgagggaccgtacggcctcatcatctgcccttctagggagctggcgaggcag
actcatactataattgagtactactgtaagttgctggaagatgagggagctcctcagttg
cgatgtgccttgtgtattggaggcatgtctgtgaaagaacagatggaggtggtcaaacgt
ggggttcatatgatggtggccactccgggcagactgatggatctactgaacaaaaagatg
gtgagtctggacatctgtcggtatctggctctggatgaagctgacaggatgattgatatg
ggttttgaagaggacatcaggaccatcttctcttactttaagggtcagagacaaacactg
ctcttcagtgccactatgcccaagaagatccagaactttgccaaaagtgctttagttaag
cctatcactatcaacgtgggccgcgctggagctgcgagtttggacgtcattcaggaagtg
gagtatgtcaaagaagaggccaaaatggtttatctgctcgagtgtctccagaagactaca
cctccagttttactatttgcagagaagaaagcagatgtggatgccatacatgagtatctg
ctgcttaaaggtgtggaggccgtggctatacatggaggaaaagaccaagaggagcgaacc
aaagccattgaggcattcaaagggggaaagaaagatgttttggtagctactgatgtcgct
tcgaaaggtctggatttcccagctatacaacacgtggtcaactacgacatgccagaggag
atcgagaactatgtccacagaataggcagaacaggtcgatcaggaaagactggaatagcc
acaacttttatcaacaagggatgtgatgagtcggtgctgatggatctcaaagctttgttg
gtggaagccaagcagaaggttcctcctgtactgcaggtcctccaaatgggcgacgagaca
atgctggatattggaggagagagaggctgtacattctgtggtggtttgggtcacaggatc
acagattgtcccaagttggaggccatgcagacaaaacaggttaccaacattggacgcaaa
gactacttggccaacagctcgatggatttctaa
DBGET
integrated database retrieval system
