Triplophysa rosa: 130565474
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Entry
130565474 CDS
T09216
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130565474
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130565474
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
DUF1835
U-box
Prok-RING_4
Borrelia_P83
DUF4407
Motif
Other DBs
NCBI-GeneID:
130565474
NCBI-ProteinID:
XP_057208188
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Position
LG15:23429454..23431890
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AA seq
455 aa
AA seq
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MAEASISEDHFMCSVCLDLLKDPVTVPCGHTYCMRCVTDCWNREDQTGIYSCPQCRQTFS
PRPVLRKNVMFAEMMEKLKKTEVRCAVSDHCSAGPADVECDVCTGRKHKAIQSCLLCLNS
YCQTHLEQHQNLFRGKRHDLIDATAPLHDVICPRHDKILDIYCRTDQKLICTLCIDEHKN
HEKVSSAAAWTEKQSQFGERKNQLQQQIQKRQKDLQKIKDAVDSHKWCAQTAVEDCEMMF
TELISSIERRRSEVTQLIRDQETAAVSRAEGLLERLKQEMDDLRRRDAELEKLSHTHHHI
HLLQSFQSLSAPPEAPDDISVTFLFSFDAVRESVRQPRDKLQDFCTQHMRKISDSLQLTL
DLNTVNKELCLSEDNREITNTLTQHQYPDHPDRFDARQVLCRESVCGRCYWENEWTGKVV
EISVSYKSIRRKGRGDESKFGSNDQSWSLICCDSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgagtatttcagaggatcacttcatgtgttcagtgtgtctggatctgctg
aaggatcctgtgactgttccctgtggacacacttactgcatgagatgcgtcacggactgc
tggaatcgagaagatcagacgggaatctacagctgccctcagtgcagacaaaccttcagt
ccaagacctgttttaaggaagaatgtgatgtttgctgagatgatggagaaactgaagaag
actgaagtcagatgtgctgtttctgatcactgttccgctggacctgcagatgtggagtgt
gacgtctgtactggaagaaaacacaaagccatccaatcctgtctgctgtgtctcaactct
tactgtcaaactcatcttgagcaacaccagaatctcttcagaggtaaaagacacgacctg
atagacgccactgcaccacttcatgacgtgatctgccctcgacatgacaagattctggac
atttactgtcgcacggatcagaagcttatatgtactctgtgtatagatgaacacaaaaac
cacgagaaagtttcatctgcagcagcatggacggagaaacagagtcagtttggagaaaga
aagaatcaacttcagcagcagatccagaagagacagaaagaccttcagaagatcaaagat
gctgtggactctcacaagtggtgtgcacagacagcagtggaggactgtgagatgatgttc
actgaactgatctcatccattgagagaagacgttctgaggtgacgcagctgatcagagat
caggagacggctgcagtgagtcgagctgaaggactcttggagcgactgaagcaggagatg
gatgatctgaggaggagagacgctgagctggagaagctttcacacacacatcatcacatc
catttgctgcagagttttcagtctctctctgcaccacctgaagctccggacgacatcagt
gtgactttcctcttttcttttgatgctgtgagagaatctgtccgtcagccgagagacaaa
ctgcaggatttctgcacacagcacatgagaaagatctccgattctcttcagttgactctg
gatctaaacacggtgaataaagagctctgtctgtctgaggacaacagagagattacaaac
actctcacacagcatcagtatcctgatcatccggacagatttgatgcgcgtcaggtgttg
tgtagagagagtgtgtgtggacgctgttactgggagaatgagtggactggtaaagttgtg
gagatatcagtgtcatataagagcatcaggaggaagggacggggtgatgagagtaagttt
ggaagtaatgatcagtcctggagtttgatctgctgtgactccagttaa
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