Triplophysa rosa: 130566943
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Entry
130566943 CDS
T09216
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tros
Triplophysa rosa
Pathway
tros03022
Basal transcription factors
tros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130566943 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
130566943 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130566943 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130566943 (gtf2h4)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130566943 (gtf2h4)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130566943 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
130566943
NCBI-ProteinID:
XP_057210755
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All DBs
Position
LG16:16887674..16896857
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AA seq
466 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPEILDRLYNHPATCLAVYRELPSLGKNYVMRMLFLDHPLP
QAAVALWVKKDSQKDHDQCVSVLTGLRLWHSQQLQGGLQGFVLNPVFKDNLRIALLGGGK
PWADEGSSLGPDRHARDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLNQAGLMRS
EAGEAPCITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGITANPSSGSASSALG
ATPGTGDTGFIVVETNYRVYAYTNSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAIA
NGITAQQIIHFLRTRAHPIMLKQTPILPPTITDQIRLWELEKDRLQFTEGVLYNQFLSQA
DFEVLRDRAQGLGVLVWQNPAHRVMVVSPHGHSEVKRFWKRQKSNT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgcgttcagctgcagtgtaaaaacttacacgagtatctgaaggaactgagt
ccagagatactcgacagactctacaatcatccagcaacatgtctggcagtctacagggaa
cttccatcgctggggaaaaattatgtaatgcggatgctatttttagaccaccccctacca
caggccgcagttgctctgtgggttaaaaaagacagccaaaaagatcacgatcagtgtgtg
tctgtgttaactggtttacggctctggcacagccagcagcttcagggtggacttcagggt
tttgtgctcaaccctgtgtttaaagacaacctgaggatagcactgctaggcggtgggaaa
ccttgggcggatgagggcagcagtctcggtcctgatcgccatgcccgagacgtggagagt
ctcgaccgctatgccatggagcgttgggaggtcatccttcacttcatggtgggctcaccg
agcgccgccgtcagccaggatctggcccagctgctcaaccaggcagggctcatgaggagt
gaagctggtgaagctccatgtatcacatcggcagggtttcagtttctgctgctggacacg
gcctctcagctgtggtacttcaccctgcagtacctcaaaaccgcacagtcaagaggtatg
gacctggtggagattctttcctttttgttccagctgagtttttccactcttggtcgggac
tattctgtggagggcatgagtgagtccttgctcacatttttgcagcatctacgagagttt
ggcctggtcttccaaagaaagaggaagtcaagaaggtattaccccacaaggttggccata
actctagctgcaggcatcacggcaaacccttcctctggttccgcttcctctgcgcttgga
gctacaccaggaacaggagacacaggcttcattgtcgtagaaaccaactatcgcgtatac
gcctacaccaattctgaacttcagatcgcactcgtggctctatttagcgagatgctgtat
cgctttcctaatgtggtggttgctcaggtaaccagagaatcagtgcagcaggccatagct
aacggcattactgcacagcagattattcatttcttaaggacccgagctcaccccataatg
cttaaacagacccctatactccccccaaccatcacagatcagatcagactgtgggagctc
gagaaagatcgcttgcagttcactgagggagtattatataaccagtttttatcccaggct
gattttgaagtgctgcgagatagagctcagggtttgggtgtattggtgtggcaaaacccg
gctcacagggtcatggtggtgtcgccacatggacacagcgaggttaagagattctggaaa
agacagaagagtaatacatga
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