KEGG   Triplophysa rosa: 130568489
Entry
130568489         CDS       T09216                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
tros  Triplophysa rosa
Pathway
tros03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130568489 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tros03041]
    130568489 (sf3a1)
Spliceosome [BR:tros03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    130568489 (sf3a1)
 Complex B
    130568489 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    130568489 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 130568489
NCBI-ProteinID: XP_057213360
LinkDB
Position
LG17:complement(7108612..7114649)
AA seq 778 aa
MPPGPVQIVQPEPNNKADEQKEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPSDPYHAYYRHKVNEFREGKGQEPSAAVPKVMQQQASQQLPQKV
QAQVIHESVIPKEPPLEFEFMADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRN
YQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLQKLKKEAENSREVLDQVRYRVEWAKF
QERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQE
RYDKFGESEEVEMEVESEDEEDERHARDDGRAAHLDQDTQLQDMDEGSDEEEDGMKAPLP
PDNPMPPPLPPTPDHVIIRKDYDPKASKPLPPVVTPDEYLISPITGEKIQASKMQEHMRI
GLLDPRWLEQRDRSIRERQIEEEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEE
EIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDDTKEKIGPSKPN
EIPQPPLPSASPLLPKPTPPINTMPRPTPMMPPQVRTTLLPGVPVIPQPPMAPVVRLTPM
PPMLHAPRINVVPMPPSAPHIMAPRPPPMVVPASFVPAPPIPQPPSAVSAPLPPAHPPPP
HEDEPSSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLSGQVLNFNLPLTD
QVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGAVIHLALKERGGRKK
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtgcagatcgtgcagccggagccaaacaacaaggccgatgagcag
aaagaagagactccagccacaaagcccatcgtgggaatcatctacccacctccagaagtc
cggaacattgttgacaagaccgctagcttcgtggccaggaatggacctgagtttgaggcc
aggattagacagaatgagatcaacaacccgaaattcaacttcctcaaccctagtgaccct
tatcatgcctactatcggcacaaggtcaatgagttcagggagggtaaaggtcaggaacca
tccgcggctgtgcctaaagtcatgcaacaacaagcctcacagcaacttcctcagaaggtt
caagcgcaggtgatccatgagtccgtaatccccaaggagccacctcttgagtttgagttc
atggctgaccctccctccatctctgcctttgatctggatgtggtgaagctgaccgctcag
tttgtcgcccgaaatggccgtcagtttctcacgcagctgatgcaaaaggagcagaggaac
taccagtttgacttcctgcgacctcagcatagcttgtttaactactttaccaagctggta
gaacagtacacaaaggttttgattccccctaaaggtcttctgcaaaaactgaagaaggag
gcagagaattcccgtgaggtcttggatcaggtgaggtatcgtgtggaatgggccaaattc
caggagagagagcggaagaaggaagaggaggagcgagagaaggagagagtggcttatgct
cagattgactggcatgatttcgtggtagtggagactgtggacttccaacctaatgagcag
ggtcatttccctcctcccacaacccctgaggagctgggcgctcgtatcctgatccaggag
cgctatgataaattcggagagagcgaggaggttgagatggaagtggaaagtgaagatgaa
gaggatgagaggcacgccagagatgatggacgcgccgctcatctggaccaggacacacaa
ttgcaggacatggacgagggctctgacgaagaagaggacggtatgaaggctccgctgcct
cccgataaccccatgccaccacctctgccccccacccctgaccatgttatcatccgcaaa
gactacgatcccaaagcctctaagcctctgcctcctgtggtcacccctgatgagtacctc
atctcacccatcaccggtgagaagatccaagccagtaagatgcaagaacacatgcgtatc
ggtctgctggacccgcgctggctggagcagcgtgaccgcagcatccgtgagcgtcagatc
gaggaggaagtgtacgctcccggcctggacatcgagagcagcctaaaacagctggccgag
agacgtaccgatatcttcggtgtggaagaaacggccatcggtaagaagatcggagaggag
gagatacagaaaccagaggagaaggtcacatgggatggtcactcgggcagtatggctcgt
acccagcaggcggctcaagctaacatcaccctgcaggaacagattgaagcgatccacaaa
gctaaaggtctggtgcaggaggatgacaccaaggagaagattggccccagcaagcccaat
gagattcctcagccgcctctgccctcagcaagccccctcctgcccaaacccaccccacct
atcaacaccatgcccagaccgacgcccatgatgccaccccaagtgcggaccacattgctc
ccgggggttcccgtcattcctcaacccccaatggctcctgtggtgcgcctgaccccaatg
ccacccatgctgcatgcccctcgcatcaacgtggtgcccatgccaccctccgcaccacat
atcatggcccccagacctccacctatggtggtccctgcctcgtttgtacccgccccaccc
attcctcaaccacccagtgctgtttccgcccccctccctcctgcccaccctccaccgcct
cacgaggatgaaccttccagcaagaagatgaagacggaggacaacctgattccagaagaa
gagttcctgcgcaggaacaagggacctgttgcagttaaggtgcaggtgcccaacatgcag
gacaagacagaatggaagctaagtggccaagtgctcaacttcaacctgcctctcacagat
caggtgtctgtcatcaaggttaaaattcatgaagccactggtatgcctgcaggaaaacag
aagctgcagtatgagggtattttcatcaaagattccaactctctggcttattacaacatg
aacaatggagctgtcattcatcttgcccttaaggaaagaggagggaggaagaagtag

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