Triplophysa rosa: 130568889
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Entry
130568889 CDS
T09216
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130568889 (jmjd1cb)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130568889 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
zf-C5HC2
C1_2
Motif
Other DBs
NCBI-GeneID:
130568889
NCBI-ProteinID:
XP_057214073
LinkDB
All DBs
Position
LG18:complement(23338737..23441631)
Genome browser
AA seq
2497 aa
AA seq
DB search
MVVGKRFLCVSGEEPLEPAHIARWSWRAGVIRAVTHRDHDNPELTVYVEFDDLEWDKREW
VKVYEDFQVFLLEHQLVWAKRKEGVQLQGTKAKQIQWPALTFKPLVGKTVLSSITALEFF
SDRRLDFLTDEGVYQPYQDELDSLSPVLRDCPQLHEEVKAWVKDQKVQEIFMQGPYSLNG
YRVRVYRQDSATQWFTGIITHHDLFSRTMVVMNDQVLEPQNVDPSMVQMTFLDDVVHSLL
KGENIGITSRRRSRSSQNSNTAHQTTGGRPSGSTGITQGHYTRAQANSPRPVMNSPGSAP
KPASQQQQSQHAQPQVSQQHQQQPSPGQQRGSRSSRRKGSDSSVPDDEKIKDEKPDGGGK
DSSKTKSKTNKRRKADEEDKKSGLKRLKTEASDLSESSDSEISNKRSVDSSSEQSSENEL
RCKNTSKAPEDEEKSQGSQSVDMLSVSTRLSRWDEMQVTEKSGKPVAVEVAQRADSERRS
PLPPQDSSCMQNQGSGLTEVQSCIVEMKSTVKTLPKDHYSPGTPLTHTPKCVIDITEDAN
MTPSSRESSEAVSALLASQKGDVYGPESRQQNARGITGKIEFAHSEVIRPVTSVSESAAL
GERGKLQKQYASMVIKNALLTEDIRKPHKLSPSPDLPKPKSNSSPDILKPKYTLSPDIIK
SKAHSVLDSSKPKPNISPEVSKHKPRHPDNLLTAGRSALKLEQDIPRSSFKPVPPRGTLS
ESAKSQLMVEKNEHFTVYRDPALVRPESENNHVTYLHPHLHSLHTSSHGTCLTPSSHHPS
HLLPSSSIGHPVHHPHLLPSGLPTIPPGSILSGHPRLDSGLGHLTLAHHHPHQQQQFLQQ
QLPPSSLLAQTHGGSSYNQIGLYPIIWQYPNGAHSYSPGYKWVHPENAVNSDSSLRRNTP
SPWLHQPTPVSSADSMGILSHVPCRPASAEPYRPIKISSHSSPPLSKTPGELHKEEREKN
VFVNPMRGLATSHLKQEPDRSRTPTNKELHRLYMESPHGKQQPPSSSPMPQESDRNRKYK
EENRLILKESIEVAPYTAKIRSGESEREHYSRLTSQSKSHEKEVEHSDLYKYKHSVSQSL
PQTNYFTTLSNSVVNEPPRLYSSKDSYFDKVPPASSPLSLSTYSSTHSKSLSKPPPLIKH
QPETEGLMGKITEQLSQQLPVHSLSTSVVTFTERCSPAISPSAQPKGMPALRRAPVFHPP
TQQTPDRKEVAFGRLSPPTLTPIQPVSSAGKVSEQQKPPTLLPELRDEKSRAEPEAWRTG
GEPKSHDKMIRQSENSQTKPQVAMASVIVRPSTCIKYDGSPGPKMTSKEPPGGRMFAGRP
QAVVESWESGRVILPNTNLEDASDQYKKNLMRVTQSSVSSSALPVVHLVSDESTSTATSG
FSLENHSRGEELSFPVSGISSSIRPESSVSKTPTITESQEGSSRTTSPTAASAQAYSRNF
VHLKKAKAALAAAHSLGSSSASESESGSVRSSQDSPTIIQDNTTQGNPASKASPLPNGQP
VQVCQQNYHKLKKAWLTRHSEEDKNTNKSEKGTNDISELIKPCTVSLIAGSASADVDLSK
DGKGQEDKLSPEDRKTRRGPKRPYESASESGDDSDSSESKLEQRTKRQPKPTYKKKQNDM
QKRKGDNEKDDDEVKTNCIFRSAKEKTKLKLASTNGIPRSVLKDWRKVKKLKQTGESFLQ
DDSCSEIGSNLQKCRECRSIRTKKGEEPAHSPVFCRFYHFRRLSYSKNGVIRIDGFSSPD
QYDEEALGLWASDSYEENTLDLDTSKYILSYIGDKFCQLVMTENTAATWIKKDVKIAWKR
AVSGVRESCDACEATLFNIHWVCQKCGFVVCLDCYKAKEKKSSKDKELYAWLKCVKGQPH
DHKHLMPTQIIPGTVLTDLLNAMHMLREKYSIKSHCSCTGKQNALLNKLPSTNGVSQVLQ
NVLNHSNKFSVCKSDGGQQNSPVKVEANGGSSPASDNRADSKFTPPESQSPLHFLADLAE
QKSREEKKENKELCVGKIREEKEQTDALESLHSKASPLEPGSTLRDLLTTTAGKLRLGST
DAGIAFAPVYSTASQIVKSGRSMPNILDDIIASVVENKIPAGRGSKLNLKHEPVDESKAE
KQKCSEVYADIPHCWLHERRLLWLKDHRNTHNWKLFRECWTHAQPVLVSGVHKKLNSSLW
KAESFNQEFADHQGDLLNCKDGVMSNSGIKEFWDGFEDLTKRPKSKDGESVVYRLKDWPS
GEEFMALMPSRYDDLMKNLPMPEYSDPEGNLNLASHLPTFFVRPDLGPRLCCAYGVAASQ
EQDFGTANLHMEVSDIISVLVYVGVAKGNGVLSKTGVLKRLEEEDLDDNVKKRLKDSSET
PGALWHIYTSKDGEKIKEFLHKVAKEQDLEIPVDHDPIREPGCYLSRKLRQRLLDEHGIQ
GWTVVQFLGDSVLIPAGALQQVQNLHSCVQVINDFVSPEHVVHSFHLTQELRSSKEEINY
EDKLQVKNIFYHCVKNAVGVLKRCCEEEEEEGEEVNS
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcgggaagcggttcctgtgcgtgagcggagaggagccgctggagcccgcgcac
atcgcgcgctggtcctggcgagccggagtcatccgagccgtcactcaccgagaccacgac
aaccccgagctgacggtatatgtggagttcgatgaccttgagtgggacaagcgtgagtgg
gtgaaggtgtacgaagacttccaggtgtttctgctggagcatcagctggtttgggccaaa
cggaaggagggcgtccagctgcaggggacaaaagccaaacagatccagtggccggccctg
acattcaagcctctggtgggaaagacagtgcttagctccatcacagcccttgagttcttc
tctgacagacggctggactttctgacggatgaaggagtctatcagccctatcaggatgag
ttggacagtttaagtcctgttctcagagactgcccacagcttcatgaagaagtcaaagcc
tgggtcaaagaccagaaggttcaggaaatttttatgcaaggtccctattcattgaatggc
tatcgtgtacgagtctacaggcaggattcagccacccagtggttcacgggcatcatcacc
catcacgatctgttcagtcgcactatggttgtcatgaacgaccaggtactagagcctcag
aacgttgacccctctatggtgcagatgacatttctcgatgatgtggtacattcattacta
aaaggagagaacatcggcatcacgtctcgacgcaggtctcgctccagtcagaacagcaac
actgcccatcagaccacaggagggagaccaagcggctcgacaggaatcactcagggtcat
tacacgcgcgcccaagccaacagccccagaccggtcatgaattcgcccggctccgccccg
aaaccggcctctcagcagcaacaatcccagcatgcacagccgcaggtatcccagcaacac
cagcagcagccgtcaccgggtcaacagcgcggctcacgctcttcgcgacggaaaggctcc
gacagcagcgtaccagacgatgaaaagatcaaagatgaaaaaccagatggtggagggaaa
gattcttctaaaaccaaaagcaagacaaacaagaggagaaaggcagatgaggaggacaag
aagagtggtctcaaacgactcaaaacagaagcgtcagacctgtcggagagcagcgactcg
gagatctccaacaagcggagcgtggactcgtcctcagagcagagttcagagaatgagctc
agatgcaagaacacttccaaagctccagaagacgaggagaaatcccagggctcccagtca
gtggatatgttgagtgtaagcaccagactgtctcgttgggacgagatgcaggtgacagag
aaaagcggtaagcctgtggctgtggaggtggctcagcgggcggacagtgagcggagatct
ccgctgccccctcaggactcctcctgcatgcagaaccagggctcggggctgaccgaggtc
caaagctgcattgtggagatgaagagcactgtgaaaaccctccccaaggaccattacagc
ccagggacgcctctgacgcatacgcccaaatgtgtgatagatatcacggaggacgccaac
atgacacccagttccagagagagctcggaggccgtatcggccctgctggcatctcagaaa
ggtgacgtgtatggccctgagtccagacagcagaacgcccgcggcattaccggcaaaatc
gaattcgcccactcggaggtcatacggccagtgacgtcagtgagcgagtcagcagctctg
ggtgagagagggaagctccagaagcagtacgcatctatggtcattaaaaatgccttgcta
acagaagacatcagaaaacctcataaactcagtccctcccctgacttacccaaacccaaa
tccaactcatcccccgacatcctcaagcccaagtacactctctcacctgacatcataaag
tcaaaagctcacagcgttctcgactcctccaagcccaaaccaaatatatcccctgaggtg
tccaaacataaaccgcgtcaccctgacaaccttctcaccgcaggtcgctctgcactcaaa
ctcgaacaggacatacctcgctccagtttcaaacctgtgcccccacgcggcacgctgtcc
gaatccgctaaaagccagcttatggttgaaaaaaacgagcatttcacggtttatagagac
cctgccttggttcggccggagtcggagaacaaccacgtgacttaccttcatccccacctc
cattcgcttcacacctcctctcatgggacgtgtctgacgcccagctcgcaccacccgtcc
catctcctcccttcttcttccatcggtcatccggtgcaccacccacacctgctgcccagc
gggctgcccactattccaccaggctccatcctgagtggtcatccccggctggactctggg
ctcggacacctgaccctggcccaccatcatccccaccagcagcagcagttcctccagcag
cagctgccgccctcatcactgctggcgcagacgcacggaggctcatcctacaaccagatc
ggactctaccccatcatctggcagtaccccaacggtgcccactcctactcgcccgggtac
aagtgggttcatccggaaaatgctgtcaattcagactccagcctgcgcaggaacaccccc
agcccgtggttacaccagcccacccctgtatcctctgcagacagcatgggcattttgagc
catgttccttgcagaccagccagtgctgaaccctatcgacccatcaagatcagctcacac
tccagcccaccgctctcgaaaaccccaggagaactccacaaagaagagcgggagaagaat
gtgtttgtgaatccaatgcgtggcctggccaccagccacctgaagcaagagccggaccgc
agccggacgcccaccaataaagaactgcaccgtctctacatggagtccccccacggcaaa
caacaaccaccatcatcatcacccatgcctcaagagtctgaccgcaacagaaaatacaaa
gaagagaaccgtctcatcctgaaagagagtatagaggtggccccctacactgccaagatc
cgctccggggagtctgagcgtgaacattactctcgccttacctcacagtccaaaagccac
gagaaagaggtggagcactcggatctgtacaagtacaaacactcggtgtcccagtccctt
cctcaaaccaactacttcaccacactgtctaacagcgtcgtgaatgagccgccgcgactt
tactcatccaaagattcttactttgataaggtgcccccagcgtccagccccttgtctctg
agcacttacagctcaacccacagcaagtccctgtccaagcctcccccgctcattaaacac
cagccagagacagaggggctgatgggtaagatcacagagcagctcagtcaacagctgccc
gtgcactcactcagtacctcagtggtgacgttcactgagcgctgtagcccggccatctct
ccgtctgctcaacccaaaggtatgccggccctgcgtcgagctcccgtgtttcacccgccc
acccaacagacacctgaccgcaaggaagtagcctttggccgtctttccccacctacgctc
acccccatccaacccgtcagctcggccggaaaggtgtcagagcagcagaagccgcccacc
ctgctcccagagctcagagacgagaagagcagagccgagccggaggcctggaggaccgga
ggagaaccgaagagccacgataaaatgattcgacagtcagagaacagccaaaccaagccg
caggtagccatggcatctgttatcgtccgaccttctacttgcataaagtacgacggctcg
ccgggtcccaagatgacctccaaagagccgcccggtggtagaatgtttgccggccggcct
caggcagtggtggagagctgggaatccggcagagtcatcctacccaacacaaacctggag
gatgccagtgatcagtacaagaaaaacttgatgagagtaactcagagtagtgtttccagc
tcagcgctgcctgtggttcatttagtgagtgatgaaagcacttccaccgccactagcggg
tttagcctggagaatcatagtagaggagaagagctgtccttccccgtctctggcataagc
agtagtatcagaccggagagctctgtgtctaaaactcccaccatcactgagtcacaggag
ggcagctcaagaaccacttcacctactgccgcctccgcgcaggcctactccaggaacttt
gttcacctgaagaaggccaaagcagctctggctgcggctcattccctcggctccagcagc
gcctcagagagcgagagcggtagtgtccgatcctctcaggactcgcccaccatcatccag
gacaacactacgcaaggcaaccccgccagcaaagccagcccgttacccaacggacagcca
gtgcaggtgtgccaacaaaactaccacaagctgaagaaagcctggctcacacgccactct
gaggaggacaaaaacaccaacaaatctgaaaaaggcaccaatgacatttcagagctaata
aagccatgcaccgttagcctgatcgcaggatctgcctctgctgatgtggacttgagcaaa
gacggcaaaggacaagaggacaagctgtcaccggaggacagaaagacacggcgcgggccc
aagcgtccgtacgaatcagcctcggagagcggagacgactcggactctagcgagagtaag
cttgaacagaggactaaacggcaacccaaacccacctacaaaaagaagcagaacgacatg
cagaagagaaagggagacaatgagaaggacgacgacgaggtgaagacgaactgtatcttc
cggagtgccaaggaaaaaaccaaacttaagctggccagcaccaatggtattccgcggtca
gtgctgaaggactggaggaaggtgaagaagttaaagcagacgggtgaatccttcctgcag
gacgactcgtgttcagagatcggatccaacttacagaagtgtcgagagtgtcgctccatc
cgcacaaagaaaggagaagagcctgcccactcgcccgtcttctgtcgcttctatcacttc
cgccggctctcttacagtaagaacggagtgatccggatcgatggcttctcgtctcctgat
cagtatgatgaagaggctctcggtctctgggcttcagattcttatgaagaaaacactctg
gatctggacacctccaaatatatcctcagctacatcggtgacaagttctgtcagctggtc
atgactgagaacacagcggccacgtggatcaagaaagatgtcaagatcgcgtggaagcga
gcggtgagcggggtgagagagagctgtgatgcgtgtgaagccaccttgtttaacattcac
tgggtctgccaaaaatgtggatttgtggtgtgtttggactgttacaaggccaaagagaag
aagagctccaaagacaaagagctgtacgcctggttgaagtgtgtcaagggacaaccacac
gatcacaagcacctgatgccaacacagatcattcctggaactgttctgacagatctgctg
aacgctatgcacatgctcagggagaagtacagcattaaatcccactgctcgtgtacgggg
aaacagaacgctcttctcaacaaactgccctccaccaatggcgtctcccaggttttgcag
aacgtgctcaatcacagcaacaagttctctgtgtgtaagtctgatggagggcagcagaat
tctccggtgaaggtggaggctaacggtgggagcagtccggccagcgacaacagggccgac
agcaagttcaccccgccggagtcgcagtcacccctgcacttcctggccgacctggcagag
cagaagtcccgcgaggaaaagaaggagaataaggagttatgtgtagggaagataagagag
gagaaggagcagactgatgctttagagtctctacacagtaaagcatcacctctggagccg
ggctcaaccctgcgtgatctcctcaccaccaccgctggaaaactgcgcctgggctcaacg
gatgcaggcatcgcattcgcacccgtctactccactgcatctcagattgtgaagagtggc
cgcagtatgcccaacatcctggatgacatcatcgcctctgtggtggagaacaagatcccg
gcgggccgcggcagtaagctgaacctgaagcacgagcctgtggacgagtccaaagcagag
aagcagaaatgttcagaggtgtacgcagacatccctcactgctggctccacgagcgcaga
ctcctctggctgaaagatcatcgcaacacccacaactggaaactcttcagagagtgctgg
acacacgctcagcccgtgctggtgtctggagtacacaagaagctcaacagcagtctgtgg
aaagccgagtccttcaaccaggagtttgctgaccatcagggagatctcttgaactgtaag
gatggagtgatgtccaactcgggcatcaaggaattctgggatggttttgaggacctgacg
aaacggcccaaatctaaagacggggagagtgttgtgtatcgtctgaaggactggccgtca
ggagaggagtttatggctctcatgccctccaggtatgatgacctcatgaagaatctccca
atgccagagtattcagatcctgagggaaacctcaacctggcctctcatctgcccaccttc
tttgtccggccggacctgggccctcgcctgtgctgcgcttacggtgtcgcagcctctcag
gagcaagactttggcactgctaacctgcacatggaggtgtctgacatcatcagcgtgctg
gtttatgtgggcgtggccaaaggcaatggtgtcctctcaaagacaggagtactgaagagg
ttagaggaggaagatctggacgacaacgtaaagaaaagattaaaggactcgagcgagact
cctggagccttgtggcacatctacaccagcaaagacggcgagaagattaaagagtttctg
cacaaggtggcgaaagagcaggacttggagataccagtagaccatgacccgatccgtgag
cccggctgctacttgagccgtaaactgcgtcagcgactgctggatgaacacggcattcag
ggctggactgtggtgcagtttctgggagattcggttctgattccggctggagctctgcag
caggtgcagaatcttcacagctgtgtccaggtcatcaatgacttcgtctccccggagcat
gtggtgcattcattccacttaacccaggagctgaggtcctcaaaagaggaaatcaactat
gaagataagctgcaggtcaagaacatcttttaccactgcgtgaagaatgcagtcggagta
ttaaagaggtgctgtgaggaggaggaggaggagggagaggaggtgaactcatga
DBGET
integrated database retrieval system
