Triplophysa rosa: 130571588
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Entry
130571588 CDS
T09216
Symbol
tpcn1
Name
(RefSeq) two pore channel protein 1 isoform X1
KO
K16896
two pore calcium channel protein 1
Organism
tros
Triplophysa rosa
Pathway
tros04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130571588 (tpcn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130571588 (tpcn1)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
130571588 (tpcn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Pilin_N
YMF19
Motif
Other DBs
NCBI-GeneID:
130571588
NCBI-ProteinID:
XP_057218679
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Position
LG2:complement(27554359..27577087)
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AA seq
805 aa
AA seq
DB search
MADGDDDVPLILTWDDANSGLLEEEENGVGNYDTVNNVVIPASGATEPRAQNSLQHSWEM
NYQEAAIYLQEGENNDKFFTHPRSAHALSAYLFAHNHLFYMMELLTAVLLMLLSLSEAPA
VPSLRLDVYVHATLELLALVMVAFELCMKLRWLGFHTFIRHKRTMVKACVLFIQFIEAIV
VLVRQTSHLRVTRALRPIFLVDCRYSGAVRRNLRQIFQSLPPFIEILLLLLFFMVIFAIL
GFCLFSRNAVDPYFNTLENSIVSLFVLLTTANFPDVMMPAYSKNRWSCIFFIVYLSIELY
FIMNLLLAVVFDTFNGVEKMKFKSLLLHKRSAIEHAFQLLVSRQRPDGVSLKQFDGLMRF
YRPRMNARDCFLTFKSLNQSGATMLSLQEFYRFYEVIGLKWKARRSGEHWFDDLPHTVFL
IFKGINLLVKSKAFQYAMYLVVAINGIWILVETNMLNDGVSWTRVVPWSYIVFLTIYGIE
VFLKITGLGPMLYFSSGWNLFDFSVTVFAFLGLIALAFDMEPFYFIVVLRPFQLLRLFKI
KQRYRNVLDTMFELFPRMASLGLTLIIFYYSFAIVGMEFFADVVYPNCCNTSTVANAYRQ
INETIGNRTVLQEGYYYLNNFNNILSSFVTLFELTVVNNWYITMEGITSQTTHWSRLYFM
TFYIVTMVVMTIIVAFILDAFVFRMNYSRQNREPLGDPEDEKGIVFETEVSQTEALQTLD
LYKHTLRNTNLSSLQGMCAALERCGQSSLVFLGRRSRTKSDLSMKMYEEEILEWYEEYST
TNLQPDETFHRSLNSPEANATDSIN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggggacgacgacgtgcctctgattttgacctgggacgatgcgaacagcgga
ctgctggaggaggaagagaatggggtaggaaattatgatactgtaaataatgtcgtcatt
ccagcctcaggagcaaccgaacccagggcccagaattcactgcagcacagctgggaaatg
aactaccaggaagcagcaatatacctacaggagggagagaataatgacaagtttttcact
catccgcggagtgcccacgcgctcagcgcctacctgttcgctcataatcatctgttctac
atgatggagttgctgactgcagtgttgctcatgctcctgtccctctctgaagctcctgca
gtcccctctctccgcctggacgtttatgttcatgctactctggagttgctggcattggtg
atggtggcgtttgagttgtgtatgaagctccggtggcttggctttcacacattcatacga
cataagaggaccatggtgaaggcgtgtgtcctgtttattcagttcatcgaggcgattgta
gtcttagttcggcagacgtcccacctgcgtgtgacgagagccctgcgacccatctttctg
gtggactgtcgttacagtggagctgttcgcagaaacctgcggcagatatttcagtctctt
ccacccttcattgaaattctactgttgctgcttttcttcatggtcatctttgccattctg
ggtttctgtctgttctcccgcaacgctgtcgacccttatttcaacacattggagaacagc
attgtgagtttgtttgtccttctgacaactgcaaactttccagatgtaatgatgccggca
tattcaaagaatcgttggtcatgcattttcttcattgtgtatttgtccatcgagctctac
ttcatcatgaacctgctcttggcggtagtttttgacacctttaatggagttgagaagatg
aagtttaaatctttgcttctacacaagcggtctgccatcgagcatgccttccagctgctg
gtcagtcgacagaggccagatggcgtgtctctgaagcagtttgacggactcatgcgattc
tatcggcctcgaatgaacgcacgggattgtttcctcacctttaagtccctgaaccaatca
ggcgcaactatgttgagcctccaggaattttataggttttatgaggtgattgggctcaag
tggaaggctcgacggagtggggagcactggtttgatgatctacctcatactgtgtttctt
atctttaaaggaattaatttacttgtgaagtccaaagccttccaatatgcaatgtatctg
gtagtagcgattaatggcatttggatcctggtggagacaaacatgttaaatgatggggtc
tcgtggactcgtgttgtcccttggagttacattgttttcctcacaatttatggcatcgag
gtctttttgaagattacgggtcttggtcctatgctatatttcagttcaggatggaacctc
tttgatttctcagtaacagtctttgcctttctgggattgattgctctggcctttgacatg
gagccgttttacttcattgtggtgttgagaccttttcagcttctccggttgtttaaaatt
aagcagcgttatcggaacgtactggacacaatgtttgaactgttcccacgtatggccagt
ctaggtttgactctgattatcttctattattccttcgccatcgttggaatggagtttttc
gccgatgttgtttatccaaactgctgcaacactagcactgttgctaatgcatatcgtcag
attaatgaaaccattggcaaccggactgtgctgcaggagggatattactatctcaacaac
ttcaataacatcctgagcagctttgtcactttatttgagctaacagtggtgaacaactgg
tacatcactatggaaggcatcacatcccaaaccacccattggagtcgcctgtatttcatg
actttttacattgtcaccatggttgtcatgactataattgttgccttcattctggatgcg
tttgtcttcagaatgaactacagtcggcagaacagagagccactgggagacccagaagat
gaaaaggggattgtatttgagacagaggtatctcaaaccgaagctcttcagactctggac
ttgtacaaacacacactgcgcaacacaaatctaagctcacttcaggggatgtgtgcggct
ctggagcggtgcgggcagtcttcattagtgtttctgggtcgaaggtcacgtaccaagagc
gacctcagtatgaagatgtatgaggaagagattctggaatggtacgaggaatattccaca
acaaaccttcaacctgatgagacattccacagaagtctgaacagccctgaggccaatgca
acagacagcattaattaa
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