Triplophysa rosa: 130571955
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Entry
130571955 CDS
T09216
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
tros
Triplophysa rosa
Pathway
tros03250
Viral life cycle - HIV-1
tros04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130571955 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130571955 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130571955 (samhd1)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130571955 (samhd1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
130571955
NCBI-ProteinID:
XP_057219281
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Position
LG21:19874935..19984910
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AA seq
619 aa
AA seq
DB search
MMEKRMKRPREEQDEESVLNVKQVSDEDFRLWGVDETVSYLQRAGLGEWEHIFREQEITG
LGLPYLTEVHLENMGISSLGSRLRVLHCLQKLWQISNEAMKVFNDPIHGHIEMHPLLVRI
IDTAQFQRLRHIKQLGGTYLVFPGASHNRFEHSIGVGYLAGCLVQALNARQPELLISKQD
ILCVQIAGLCHDLGHGPFSHMYDGMFIPKVRPGEKWKHEMASVQMFDHLVRVNGLQAVML
QHGMTLPDDLIFIKEQIAGPLDTSILDTTWPYKGRPKEKSFLYEIVANKRNGIDVDKWDY
FARDCYHLGIQNNFDYQRFLKFARVCEVRGKKHICTRDKEVGNLYDMFHTRNCLHRRAYQ
HKVGSIIETMITEAFVKADPYIQIQGSSGRMFTISSAIDDMEAYTKLTDHIFEKILYSST
PELSDAREILQNIVCRRLYKCVGQTTPETHVDVSQEKLLDWAKEVAGSKPSGIDENLMAE
DFVVSVIHMDYGMKEKNPMNNVHFYCKNDPTKAIKIRKKQVSKLLPERFAEQLIRVYCKK
TDDESLKAARKCFVQWCMDKNFTKPQDGDVIAPELTPLKKDWHTHERDDEDSEIDEDSEI
SDKTPKKTGRNVKVKLFQA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaaacgaatgaaacggccgagagaagagcaagatgaagaaagtgtgttgaat
gtgaaacaggtttctgatgaagattttaggctctggggcgtcgatgaaactgtctcttat
ctgcagagagcaggactcggtgaatgggagcacatcttcagagaacaggaaataacaggg
ctggggctaccataccttacggaggtacatttggaaaacatgggcatttcctctttagga
tcacgcctgagagttcttcactgccttcaaaagctctggcaaatctcaaatgaagccatg
aaggtttttaatgatcctatccatggccatattgagatgcatcctctcctggtccgaatc
atagacacggcacaatttcagagacttcgtcacatcaaacagcttggaggaacttacctg
gtgttccctggggcttcccacaaccgctttgagcattcgattggagtgggctatttggca
ggatgtctagtccaggctctcaatgcaagacagccagagctactcatatcaaagcaagac
attctttgtgtccagattgctggcctgtgccatgacttaggtcatggcccattctctcat
atgtacgatggcatgttcatccctaaagttcggcctggtgagaaatggaagcatgagatg
gcctcagttcagatgtttgaccaccttgtaagggtaaatggtcttcaagccgtgatgtta
cagcatggcatgactctacccgatgatcttattttcattaaagagcagattgccggaccc
ctggatacctccatattggacactacgtggccatataaaggcaggccgaaggagaaatca
ttcctgtatgagattgtggctaataaaaggaatggcattgatgtagacaaatgggattat
tttgctcgagactgctaccatctcggtattcaaaacaactttgactatcaacgtttcctc
aagtttgcacgagtgtgtgaagtaagaggaaagaaacacatatgtaccagagacaaggaa
gttggtaatctctatgacatgtttcacacccggaactgcctccatcgacgggcgtatcag
cataaagtgggcagcatcattgagaccatgataacagaggcctttgtaaaggctgatcct
tatattcagatccagggttcctctggcaggatgtttacaatctcttcagctatagacgac
atggaggcgtacaccaaacttacagatcatatctttgagaagattttgtactcatccaca
ccggagctgtctgatgcccgagaaatcttacaaaacattgtctgtagacgtttgtataag
tgtgtgggtcagaccaccccagagacgcatgtggatgtgtcacaggaaaaactgcttgat
tgggcaaaagaggtagctggttccaaacccagtggcatagatgaaaacctgatggctgag
gactttgtggtcagcgtcattcacatggattatggaatgaaggagaaaaaccccatgaac
aacgttcacttctactgcaagaacgatcccacaaaagccatcaagattcgcaaaaaacag
gtgtccaaacttctgcctgagcggtttgcagaacagctgatcagggtttactgtaaaaag
actgatgatgaaagcctaaaagctgccaggaagtgtttcgtccagtggtgcatggacaaa
aacttcactaaaccacaggatggagatgttattgctccagagctcaccccccttaaaaaa
gactggcacacccatgaaagagatgatgaagacagcgagatagatgaggattccgaaatt
tcagataaaacacccaaaaagacaggtcgtaacgtaaaagtcaagctttttcaagcttag
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