Trichoderma reesei RUT C-30: M419DRAFT_77565
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Entry
M419DRAFT_77565 CDS
T06031
Name
(GenBank) transcription factor Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03022
Basal transcription factors
trr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M419DRAFT_77565
09124 Replication and repair
03420 Nucleotide excision repair
M419DRAFT_77565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trr03021
]
M419DRAFT_77565
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_77565
Transcription machinery [BR:
trr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M419DRAFT_77565
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M419DRAFT_77565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-ProteinID:
ETS02346
JGI:
TrireRUTC30_1_77565
UniProt:
A0A024SCV6
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MSINPSLSLAEYLERLPGTTFKKLYQQPSTTFAIFRRMLPHLAKTFVMRMLFLPHPMTLA
DLDAWVKPEAKRKKDQSLSILRSLHIVQISAPSKEKPQEIQLMSNFKRSLRLALTGGGNH
NSFGVPSSLMVPPEIDLPFLDRYARKKWEDVLHFVVSSVGYKSSLGEGSGPNKGVKELLI
AGQLVDRRPNGSLGITQAGFTFLLQEANAQVWTLLLLWLEVLGNNKSSGLDPVDMLSFLF
MLASLELGRAYDTNALTEERRNMLPSLVDFGLIYIPQHKRSMFFPTRLATTLTSGGNSLR
TISEGSLGLLGGGGTGEQAGSVVIETNYRLYAYTQSALQIAVLALFAKLNMRFPDMVAGR
LSRASIRQAINFGITADQIISYLSAHAHEQMHRTAALTNKPVLPPTVVDQIRLWQLENER
MKTTSGFLFRDFTDDKDYLDTARFSEEIGVLVWRNDNTRMFFANKHEQIKDFLKSRKKAE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcaacccttccctctctctcgccgaatacctggagcggctgcctggcacaacc
ttcaagaaactgtaccagcagccctccacgacgttcgccatcttccggcgcatgctgccg
catctcgcaaagactttcgtcatgagaatgctctttcttccccatcccatgacgctcgcc
gacctggacgcatgggtgaagccggaagccaagcggaagaaagaccagtccctctccatc
ctgcgaagcctccacattgtccagatatccgctccgtcgaaagagaagccacaggagatc
cagctcatgtccaacttcaagagatcgctgcggctggccctcaccggaggcggtaaccac
aactcgtttggcgtgccctcttcgctcatggtcccgcccgagattgacctgccgttcctc
gatcgatatgcgcgcaagaagtgggaggacgtgttgcactttgtcgtgtccagcgttggc
tacaagagcagcttgggcgaaggctcagggccgaacaagggcgtcaaggagctcctcatc
gcaggccagctggtcgacaggcgaccaaacggaagcttgggcatcacacaagccggcttc
acctttctgttgcaggaggcaaacgcacaagtctggacgctgctcctgctgtggctggaa
gtcctaggcaataacaagtcctctgggctggatcccgtcgacatgctctcgttcctcttc
atgctggcgagcctggagctggggcgggcgtacgacacgaatgcgctgacggaagagcgg
aggaatatgcttccttccctcgtcgatttcggcctcatctacatcccccagcacaagcgc
tccatgttcttcccgacccgactggcgacgaccctgacgagcggaggaaacagcttgcgg
accattagcgagggttcgctcggccttttgggcggcggcggcaccggcgagcaggccgga
agcgtcgtcatcgagaccaactaccgcctctacgcatacacccagtcggccctccaaatc
gccgtgctcgccctcttcgccaagctcaacatgcgcttccccgacatggtcgccggccgc
ctgtcccgcgcctcgatccgccaggccatcaacttcggcatcaccgccgaccagatcatc
tcgtatctctccgcccacgcccacgagcagatgcaccgcaccgccgcgctcaccaacaag
ccggtcctgcccccgaccgtcgtcgaccagatccgcctgtggcagctcgagaacgagcgg
atgaagacgacgagcggcttcttgtttcgggactttaccgacgacaaggactacctcgac
acggcgcgcttttccgaggagattggcgtgctggtttggagaaacgacaacacgcgcatg
tttttcgcgaacaagcatgagcagattaaggatttcttgaaatccaggaagaaggctgag
tga
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integrated database retrieval system