KEGG   Trichoderma reesei RUT C-30: M419DRAFT_77565
Entry
M419DRAFT_77565   CDS       T06031                                 
Name
(GenBank) transcription factor Tfb2
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
trr  Trichoderma reesei RUT C-30
Pathway
trr03022  Basal transcription factors
trr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:trr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    M419DRAFT_77565
  09124 Replication and repair
   03420 Nucleotide excision repair
    M419DRAFT_77565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trr03021]
    M419DRAFT_77565
   03400 DNA repair and recombination proteins [BR:trr03400]
    M419DRAFT_77565
Transcription machinery [BR:trr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     M419DRAFT_77565
DNA repair and recombination proteins [BR:trr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     M419DRAFT_77565
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-ProteinID: ETS02346
JGI: TrireRUTC30_1_77565
UniProt: A0A024SCV6
LinkDB
Position
Unknown
AA seq 480 aa
MSINPSLSLAEYLERLPGTTFKKLYQQPSTTFAIFRRMLPHLAKTFVMRMLFLPHPMTLA
DLDAWVKPEAKRKKDQSLSILRSLHIVQISAPSKEKPQEIQLMSNFKRSLRLALTGGGNH
NSFGVPSSLMVPPEIDLPFLDRYARKKWEDVLHFVVSSVGYKSSLGEGSGPNKGVKELLI
AGQLVDRRPNGSLGITQAGFTFLLQEANAQVWTLLLLWLEVLGNNKSSGLDPVDMLSFLF
MLASLELGRAYDTNALTEERRNMLPSLVDFGLIYIPQHKRSMFFPTRLATTLTSGGNSLR
TISEGSLGLLGGGGTGEQAGSVVIETNYRLYAYTQSALQIAVLALFAKLNMRFPDMVAGR
LSRASIRQAINFGITADQIISYLSAHAHEQMHRTAALTNKPVLPPTVVDQIRLWQLENER
MKTTSGFLFRDFTDDKDYLDTARFSEEIGVLVWRNDNTRMFFANKHEQIKDFLKSRKKAE
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtctatcaacccttccctctctctcgccgaatacctggagcggctgcctggcacaacc
ttcaagaaactgtaccagcagccctccacgacgttcgccatcttccggcgcatgctgccg
catctcgcaaagactttcgtcatgagaatgctctttcttccccatcccatgacgctcgcc
gacctggacgcatgggtgaagccggaagccaagcggaagaaagaccagtccctctccatc
ctgcgaagcctccacattgtccagatatccgctccgtcgaaagagaagccacaggagatc
cagctcatgtccaacttcaagagatcgctgcggctggccctcaccggaggcggtaaccac
aactcgtttggcgtgccctcttcgctcatggtcccgcccgagattgacctgccgttcctc
gatcgatatgcgcgcaagaagtgggaggacgtgttgcactttgtcgtgtccagcgttggc
tacaagagcagcttgggcgaaggctcagggccgaacaagggcgtcaaggagctcctcatc
gcaggccagctggtcgacaggcgaccaaacggaagcttgggcatcacacaagccggcttc
acctttctgttgcaggaggcaaacgcacaagtctggacgctgctcctgctgtggctggaa
gtcctaggcaataacaagtcctctgggctggatcccgtcgacatgctctcgttcctcttc
atgctggcgagcctggagctggggcgggcgtacgacacgaatgcgctgacggaagagcgg
aggaatatgcttccttccctcgtcgatttcggcctcatctacatcccccagcacaagcgc
tccatgttcttcccgacccgactggcgacgaccctgacgagcggaggaaacagcttgcgg
accattagcgagggttcgctcggccttttgggcggcggcggcaccggcgagcaggccgga
agcgtcgtcatcgagaccaactaccgcctctacgcatacacccagtcggccctccaaatc
gccgtgctcgccctcttcgccaagctcaacatgcgcttccccgacatggtcgccggccgc
ctgtcccgcgcctcgatccgccaggccatcaacttcggcatcaccgccgaccagatcatc
tcgtatctctccgcccacgcccacgagcagatgcaccgcaccgccgcgctcaccaacaag
ccggtcctgcccccgaccgtcgtcgaccagatccgcctgtggcagctcgagaacgagcgg
atgaagacgacgagcggcttcttgtttcgggactttaccgacgacaaggactacctcgac
acggcgcgcttttccgaggagattggcgtgctggtttggagaaacgacaacacgcgcatg
tttttcgcgaacaagcatgagcagattaaggatttcttgaaatccaggaagaaggctgag
tga

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