Terriglobus roseus: Terro_0711
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Entry
Terro_0711 CDS
T02140
Name
(GenBank) collagen triple helix repeat protein
Organism
trs
Terriglobus roseus
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
CBM_5_12
TGFb_propeptide
Motif
Other DBs
NCBI-ProteinID:
AFL87046
UniProt:
I3ZCS8
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Position
complement(796615..800337)
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AA seq
1240 aa
AA seq
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MPLCLHIRNGLKRGWPLLAVAACALPASSVAQTGTLTADTAVSTARPSTNYGTLSNLYVS
SDSTVLLRFDLGTLPASTTASQISRATLRVFANRVNTPGVLTVAAINAAWAEGAVTAQTI
PSTGNAVEVFPVTDEGQFVTVDVTSLVKTWITTPSRNFGLALTAGTADVVLDSKESDTTA
HPAQLEIALASAAIGATGPQGPKGDIGATGAQGPAGPQGAMGAAGPQGPKGDTGPAGSGL
TYRGPWAVATSYGLNDVVTFEGAAWVSSLSGNSGATPSGGSTAWGVLVPAADGGTPTSLN
GLLFAGDFASTTNYVANQVVTWQSAAWVSLHDGNHGNTPDTTPSEWATLVPAAVGLTGPP
GAPGATGAQGPQGERGAVGDTGPRGVPGTIGATGRPGFVYRGAYDSVANYATGDVVVWQG
GSWASLVDGNAGNTPDASPAHWGTIAAQGLTGGTGAMGPQGPAGPQGLPGTQGLVGPQGP
TGPVGSTGPQGVAGRDGAQGARGDVGPSGLKGDPGPVGLIWQGAYDSGTNYATHDAVAWE
GQTWLSLHDKNHGNTPESSPADWTLLAAMGATGAQGLQGAAGLQGPQGVVGPQGPQGIPG
DVGATGPQGLPGMQFLGVYDSTQNYGLHDAVTSGGGAWISLQAMNHGNLPGGSPVWWQQI
AAPGGLGAIGPAGPAGVAGPVGPVGPQGLTGPTGPQGQPIRFLGAWSNRASYVTGDAVFY
RGSAYIAMGAINGNAPGLDPLWSLLAQQGDTGAAGPQGPQGVAGVTGATGATGPVGATGA
AGLRWLGSWDAAMGYVTGDAVAYNGASYVSLSSANVGVTPGTAPMWSLMAAAGARGLAGA
DGRNGAAGADGAAATIAIGTVSTGTAGTAASVQNVGTANAASLNFILPQGATGATGAPGL
NYQGTWASGTGYAKNDVVYRAGSSYVSRVPGNLADPLASVMNNSGEWNLLASEGAPGAAT
VSIGTVTGGATAGVTNSGTQNAAVLNFTLPRGATGAAGPQGLTFLGAWDAVVAYAATNAV
SYNGSSYVAQTASTGVHPVGDAGSAGAWTLLASQGAAGAAGPQGPAGPAGAAGSAPTVAI
GATHTLAAGSAASVSNVGTATALQLEFSIPQGAAGSGGSSTSGVYTTVHTVAAASQGAQV
YSPLVDGRNATDVNSLLAYLPATCKLNSVLVHNASAVDVLFDIHTGTPGNMVSVSRCTAK
ASAATTCNGPGTLGASNFVSFGITTTSTVTTYLYTQFLCS
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtgtctgcatatccggaacggactcaagcgaggatggccgctgctggcggtg
gccgcgtgcgccctgccggcgtcttccgttgcgcagaccggcacgctgactgcggatact
gcggtgagcaccgcgcggccatcgacgaactatggaacgctgagcaatctttatgtcagc
agtgacagcactgtgctgttgcggttcgacctgggtacactgccggcttcgacgacggcc
tcgcagatcagccgggcgacgctgcgggtctttgccaatcgcgtgaatacgccgggggta
ctgacggttgcagccatcaacgccgcctgggcagaaggcgccgtgacggcccagacgatc
ccgtcgactggcaatgcagtcgaggtattccccgtgacggatgagggccagtttgtgacg
gtggacgttacttcactggtgaagacgtggatcacaacccccagcaggaactttggcctg
gctctgacggcgggaacagccgacgtggtgctggacagtaaagagagtgacacgacggcg
catccggcacaattggagatcgcgctggccagtgctgctatcggagcgacggggccgcag
ggtccgaagggtgacatcggagcgacgggggcccaggggcctgcgggtccgcagggtgct
atgggagcggcaggtccacagggaccaaagggcgataccggacccgccggcagcggcctg
acctatcgcggaccgtgggccgtcgctacttcttatggactgaatgatgtggtcaccttt
gagggcgcggcctgggtctcttccttgtcgggaaactctggagctacaccgtccggcggt
tcgactgcctggggagtgctcgtgccagcggctgacggtgggacacccacgagcctcaat
ggccttctcttcgccggcgactttgcgtccacgacaaactatgtggcgaaccaggtggtg
acctggcagagcgcagcatgggtcagcctgcatgacggcaaccatggcaacactccggat
accactcccagtgaatgggcgacgctggtgccggcagccgttggtctgaccggaccgccg
ggcgcgccgggcgcaaccggggcgcagggtccacagggggagcgcggtgcggtgggcgat
accggcccgcggggcgtccctgggactatcggcgcgacggggcgtccgggattcgtctac
cggggtgcctacgactccgttgcgaactatgccacgggagacgtggtggtgtggcaggga
gggtcgtgggcgtcgctggtggatgggaatgctggcaacactccggatgcttcgcctgct
cactggggcacgattgccgcacaaggactgaccggcgggacgggtgccatggggccgcag
gggccggccggtccccagggcttgccgggaacacagggactcgttggaccgcaggggccc
accggaccggttggttccactgggccgcagggagtggcggggcgtgacggtgcgcaggga
gcgcgaggcgatgtgggaccttctggactgaagggggatcccgggccggtggggctgatc
tggcagggagcttacgactccggaaccaattacgcgacgcatgacgcggtggcgtgggag
ggacagacatggctgtcgctgcatgacaagaatcacggcaacacgccggaatcatcgccg
gcggactggacgctgctggcagcgatgggcgcaaccggggcgcagggactgcagggcgcg
gcgggattgcaggggcctcagggtgttgtgggaccacagggaccgcagggcattccgggc
gacgtgggcgccactgggccgcagggtctgccggggatgcagttcctgggtgtctacgac
agcacgcagaactacggtttgcatgatgcggtgacgtccgggggtggggcgtggatctcg
ctgcaggctatgaaccatggcaacctgccgggggggtcgccggtctggtggcagcagatc
gctgctccgggcggactgggtgcgatcgggcccgctggcccagcgggcgttgcaggcccg
gttgggccggttggaccacagggattgaccgggcctaccggaccgcagggccagcctatc
cgcttcctgggagcgtggtcgaatcgtgcgagctatgtgacgggcgatgcggtcttctat
cgcggttcggcttacatcgctatgggggcgatcaacggtaacgcgccgggtctggatccg
ctgtggtcgctgctggcgcagcaaggcgatacgggagcggccggtccgcaaggtccgcaa
ggcgtcgccggggttaccggtgcaacaggcgctacaggaccggtaggcgcaaccggtgcg
gctggtctacgctggctggggtcttgggatgccgccatgggctacgttacgggcgacgcg
gttgcgtacaacggtgcgagctacgtttcgctatcgagtgcgaacgtcggcgttacgcct
ggcaccgcaccgatgtggtctttaatggctgccgcaggtgcgagaggccttgccggcgct
gatgggcgcaacggtgcagcgggcgctgatggcgctgcagcaacgattgccattggcaca
gtaagtactggaacagcaggtacagcagccagcgtgcagaacgtcggcacagcgaatgcc
gcctccctgaacttcattctgccgcagggcgcgaccggagcgaccggagcgccgggcttg
aactatcagggcacttgggcgagcggaaccggatatgcgaagaacgatgtggtgtatcgc
gccggctcttcgtatgtatcacgtgtgccggggaacctggccgacccgctcgcctccgtg
atgaataacagcggtgagtggaacctgctggcctcagagggtgcgccgggtgcggcgacc
gtgagcatcggaacggtgacgggcggagcgactgcgggtgtcacgaacagcgggacgcag
aatgcagcggtcttgaacttcacactgccacgcggcgccacgggagcggctgggccgcag
gggctgacgtttctgggagcgtgggatgcggtcgtggcctacgctgcgacgaacgcggtc
agttataacggctcgtcttatgttgcgcagacagcgagtaccggggtgcatcccgtgggg
gatgcgggcagcgcgggtgcctggacgctgctggcttcacagggggcggcaggcgctgca
gggccgcagggacctgcaggcccggcgggtgccgctggcagcgcaccgacggtcgcgatc
ggcgcgacccatacgcttgcggctgggtctgctgcgagtgtcagcaatgtggggacggcg
acggcattgcaacttgagttttcgataccgcagggtgcggctggcagcggcggttcgtcg
acgagtggtgtgtacaccacggtccacacggttgcagccgcgtcgcagggtgcacaggtt
tacagtccccttgtagatgggagaaatgccacggatgtgaattccttgctggcttacctt
cctgccacgtgcaagttaaattcggttcttgtccataacgcttctgccgtcgatgtcctg
tttgatatccacactgggacacccggcaacatggtctccgtatccaggtgtacggcgaag
gcaagtgcagcgaccacctgcaatggacccgggactcttggtgcaagtaacttcgtatct
tttgggataactacgacgagtaccgtcactacttatctgtacacacaatttttatgtagc
taa
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