Terriglobus roseus: Terro_1817
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Entry
Terro_1817 CDS
T02140
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
trs
Terriglobus roseus
Pathway
trs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Terro_1817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trs03400
]
Terro_1817
DNA repair and recombination proteins [BR:
trs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Terro_1817
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Terro_1817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
AAA_22
SWI2_SNF2
DUF87
AAA_16
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AFL88110
UniProt:
I3ZFU2
LinkDB
All DBs
Position
complement(2157567..2159552)
Genome browser
AA seq
661 aa
AA seq
DB search
MDFQLATDYTPQGDQPRAIAELTAGLLDGEKHQVLLGVTGSGKTFTMAKVIEASNRPAIV
LAHNKTLAAQLYHEFKQFFPNNAVEYFVSYYDYYQPEAYIPSGDLYIEKEATINEELDKL
RLSATRSLFERRDCIIVSSVSCIYGLGSPEAYYGMLMLLEKGQKIKREDITRRLVEILYD
RNDGDFRRGTFRVRGDVIEIFPTYDELAYRIELFGDEIDSLSQIDPLFGTVKQKYARLPI
YPKSHYVVQPERKSSAIDSIVSELVEWEAQLEKEGRMVEAQRIHQRTRFDLEMIKSVGYC
HGIENYSRHFSQRLPGEPPPTLFDYFPRDFMVFIDESHVTVPQLHGMWHGDRSRKGNLVD
YGFRLPSAMDNRPLKFDEFETRTGQIIYVSATPGAYELTKAAGVVTEQIIRPTGLVDPPV
EIRPIKGQIDDLLAEIRDRVEKNQRVLVTTLTKRMAEDLSGYYTEVGVKCRYMHSEIETL
ERVKLLRDLRKGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSQGSLIQTIGRAA
RHLEGRAILYADVMTDSMRRAIDETDRRREKQVAYNEEHGITPMSVVRPIGEALVGIAEA
DYVDVTTDDNVADFPNQQALDKHIAGMEQDMREAAKNFEFEKAAKLRDQIKEMRTKEFFF
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggatttccagctagccaccgactacacaccccaaggcgatcagccgcgcgccatcgca
gagctaactgccggcctgctcgacggcgaaaagcaccaggtgctgctgggcgtcaccggc
tccggcaagaccttcaccatggcaaaggtcatcgaggcgtcgaaccgccccgcgatcgtg
ctggcacataacaagacgctggcggcgcagctttaccacgagttcaaacagttcttcccg
aacaacgcagtcgaatacttcgtcagctactacgactattaccagcctgaggcttacatt
ccttcgggcgatctctacatcgagaaggaagcgacgatcaacgaagagctcgacaagctg
cggctctccgcgacgcggtcactctttgagcgccgtgactgcatcatcgtctcgtcggtc
tcgtgcatctacggtctcggttcgccggaggcttactacggcatgctgatgctgctggag
aagggccagaagatcaagcgcgaggacatcacgcgcagactggtcgagattctgtacgac
cgcaatgacggcgacttccgtcgcggtaccttccgcgttcgcggcgatgtgatcgagatc
tttccgacgtacgacgaacttgcgtatcgcattgagcttttcggtgacgagatcgactcg
ctctcgcagatcgatccgctcttcggtaccgtcaagcagaagtacgcgcggctgccgatc
taccccaagagccactatgtcgtgcagcccgagcgcaagtcatccgcgatcgacagcatc
gtgagcgagcttgtcgaatgggaggcgcagcttgaaaaagaaggccgcatggtggaggcg
cagcgcatccaccagcgcacgcgctttgacctggagatgatcaagtccgtcggctactgc
cacggcattgagaactactcgcggcacttcagccagcgcctgccgggtgagccgccaccg
acactcttcgactatttccctcgtgattttatggtgttcatcgacgagagccacgtcacc
gtgccgcagttgcatggcatgtggcacggcgatcgatcgcgcaagggtaacctggtggac
tatggcttccgcctgccttctgcgatggacaaccgtccgctgaagttcgatgagttcgag
accaggaccggtcagatcatctacgtgagcgcgacgcctggagcgtatgagctgacgaag
gccgcgggcgtcgtgaccgagcagatcatccgtcccacgggtctggtcgatcctccggtt
gagatccgtccgatcaagggccagatcgacgatctgcttgcggagatccgtgatcgcgtg
gagaagaaccagcgcgtgctggtcacgactcttacgaagcgaatggcggaggatctgagc
ggctactacacggaggttggggtgaagtgccgctacatgcactctgagatcgagacgctc
gagcgcgtgaagctgctgcgcgatctgcgtaagggcgagtatgacgtgctgatcggcatc
aacctgctgcgcgaaggcctcgatctgccagaggtttcgctggttgccattctggatgca
gataaggaaggcttcctgcgttcgcagggctcactgatccagacgattggacgtgccgca
agacacctggaaggccgggcgattctgtacgccgacgttatgaccgacagcatgcgtcgc
gccatcgacgagacggatcgccgccgggagaagcaggtggcttacaacgaggagcatggc
attacgccgatgtctgttgtccgtccgattggcgaggcgctggtgggtatcgcagaggcc
gactacgtcgatgtgacgaccgacgataatgtggccgactttccaaatcagcaggcgttg
gacaagcacattgccggcatggaacaggatatgcgtgaggcggcgaagaactttgagttc
gaaaaggccgcgaagcttcgcgaccagatcaaagagatgcggacgaaggagttctttttc
tcgtaa
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integrated database retrieval system
