Takifugu rubripes (torafugu): 101062385
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Entry
101062385 CDS
T02386
Symbol
rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101062385 (rpap1)
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101062385 (rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
101062385
NCBI-ProteinID:
XP_011616044
Ensembl:
ENSTRUG00000013352
LinkDB
All DBs
Position
2:8497798..8508583
Genome browser
AA seq
1402 aa
AA seq
DB search
MLRRPQPADSEEDLLREQQQFLTSGAPAAATVVRRPDKRRGEEGGVKGKDDAQDRDVVTI
EDLPDQLPSLTPAPPKKSRFKANRVTFEDEDVEERLDRHDSHVSAVLSKIVERDTSCTPI
SLPALTGMPFPKVLHRSETDCQGPHSLSRGKKSIFARQIAAQRLKEGAASVCTPETVQMC
DSSMETDQCRAADERPRLVSGQGLVDPDSTGETQRIHRENQAKLQGMSQSEILDEQKKLL
SQLDPRLVKFIRSQKAQSVPSSTSPSKLPRGGSSRENIPLENVSKQSDSLSAAPEPQEVT
MEGEGEEEGVPRPPAVMEEVLPVRPQKDWVHMDKVEPEKLEWMRDLPAPRKKGTKKAMQA
RFNFAGTLIPPNEDVPTHLGLHHHGEEPERAGYSLQELFMLSRSQFNQQRMLALSTLANI
LSKARAEGYTSVLKGSVLSVLLDAGLLFLLRFALDDSVEGVMSAAVHALRAFLVCAEDEE
CLDGTFSWFRGLASFPLLPSAQDDEDEEDEGVPENLRESAKEREARKSDYDVARQDVVKG
LLKMKLLPRLRYILEVVRPSPRVVQDVLEILTRIARHSSSSATQVLDCPRLMETLLSEFF
PTSWTAPSLTPRQSAYGFPLASAMKLLRVVATSGRHACARLLNSFGVTERLSHVLSIEPS
ELLLEESEAVRITAEAYRLWAVAAGYGQACKLFIELYPSLAKSLQSVHRVLDSSNPLLPL
QIQRVQALLSLLTQVTNTAGCHQELQTSMVSSQGHECPPPPPVSWGHITGLQPSLLGHLK
GFVKNLDNPLQKESSLAVIPTYLAYLHAYYQQLSKQSCFKPVETLQELELLTSDVLRPLI
SHHAVQALIKNLKSSSVVCNAQSSHVSHETIPSLPGLACHGWRDHPGLVASSSPFPLLTG
LGFLLDTIMDIHKGLCCKFADLLLSEPVTGYLRSCSQATPTLVLGRAWLLRHEHYLLYLL
LRLAHRLVPVEPQIAKHASLYHQVALVLLPWLLPGSESMAHELFSTIVFSKDFISEGHSG
GPEAVELGELKLQEQTEHTSPSLQTVGALLRDACVQLPSIRGCFLTHLAHLEPSVLTSRD
ALLGRSPWVKSHLLPELTGPILPSDWPFLPLVSLYEQTGVSGSGGLEVEVLPQGALQSVT
HCLQWLLVLEVWREEALKVVPPVAKLARLSCVFLCSSDLFLERPVQKLTWGLFRLLTRQS
RLDSLDLNVPPPGLASFQDLYLALLTQYEAVSFGDRLFGCWLLLPLQRRYSATMKLAVFG
EHVGMLRSLGVTIEQLSIPIERFTSPAEDSLPLLRLYFRSLVTGTLAPRRCPVLYVVALS
HVNAFIFSQDAAAQEVETARQSMLRKIYYLTDEVLKTHLLLFRLPQRHSEFGFDVYDQLP
PIRAKRLENILQTQESSSDQRD
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcgcccccagccagcagactctgaggaagacctcctaagagagcagcagcag
tttctgacctctggtgccccggctgcagccacagtggtccggagacccgacaagaggaga
ggggaggaaggtggagtaaaggggaaggatgatgcacaagacagggatgttgtcaccatt
gaggatcttcccgaccaactgccgtctttaacaccagcccccccgaagaagtctcgtttt
aaagccaaccgcgtcacctttgaggatgaggatgtggaggagaggctggacagacatgac
agtcacgtcagcgcagttctgtctaagatcgttgaaagagacaccagttgtacaccgata
tctctaccagcactgaccggaatgcccttccctaaagtactgcaccgttctgaaactgac
tgtcaggggccacattctttgtccagagggaagaagagtatctttgcacgtcagattgca
gctcagagacttaaggagggagcagcgtctgtgtgcactcctgaaactgtccagatgtgc
gacagcagcatggaaacagatcagtgtcgtgctgcggatgagcgaccaaggttggtgtct
ggacaggggcttgtggaccctgatagtacaggagagacccagaggatccacagagagaac
caggccaagctccagggaatgtcccagtctgagattctagatgagcagaagaagctactg
tctcagcttgatccaaggctggtgaagtttattagatctcaaaaggctcagagtgtccca
tcctctacctccccctctaaactgccccggggcggaagcagccgggaaaacattcctctc
gaaaacgtgagcaaacagtcagactccctcagtgctgctccggagcctcaagaagtgacg
atggaaggggagggggaagaagaaggggtgccacggccacctgctgtgatggaggaggtt
ctgccggtgaggcctcagaaggactgggtacacatggataaggtggagccagagaagctg
gagtggatgagagatttaccagcacccagaaaaaagggaaccaagaaggcaatgcaagct
cggtttaatttcgcaggaactctgataccccctaatgaggatgtgcccacccacttaggc
ctgcaccatcacggagaggagcctgagcgtgcaggttattccctgcaggaactcttcatg
ctgtctcgcagtcagttcaaccagcagaggatgttggccctcagcactctggccaacatc
ctgtcaaaggcacgtgcagagggttacacctctgttctgaaaggcagcgttctgtccgtg
ctgctggacgcaggcctgctcttcctgctgcgctttgcccttgacgacagtgtggagggg
gtgatgtccgcagcggtgcatgctctcagggcctttcttgtgtgtgcggaggatgaagag
tgtttggacggcaccttctcctggtttcggggtctggcgtccttccctctgctaccctct
gctcaggatgatgaagatgaggaggatgagggggtgccggaaaatttaagggagagcgca
aaggagagggaagcgaggaagagcgattatgatgtggccaggcaggatgttgtgaagggc
ttgctgaagatgaaactgctccccaggctacgttacatcctggaggtggtccggccttct
cctcgagttgtccaggacgttctggagatcctgactcgtattgcgaggcactcctcctca
tctgccactcaggttctagattgtcctcgtttaatggagacgttgttgtcagagttcttt
ccgacttcctggactgcaccatctctgactccccgccagtctgcctatggattccctctg
gccagcgccatgaagctgttgagagtggtggcgacctctggcagacacgcctgtgccaga
ctgttaaactcttttggagtgactgagcgtctgtctcatgtgttgagcatcgagcccagc
gagctgctcctggaggagtcggaggcagtcaggatcactgctgaggcctacaggctgtgg
gctgtagcagctggatatgggcaggcctgcaaattattcatagaactgtatcccagctta
gccaagtccttgcagtcagttcacagggtcctggactcctcaaaccctctgctgcccctg
cagatccagcgggttcaggctctcctttctctgctcacccaggtcacaaacactgccggc
tgccaccaggagctgcagaccagcatggtcagctcacagggtcacgagtgccccccaccc
ccacccgtgtcctggggtcacatcactgggttgcagccatcactgttggggcatttgaaa
ggttttgtgaagaatcttgataatccgcttcagaaagaaagcagcctggcggtcatcccg
acctacctggcctacttacatgcttactaccaacagctgtccaaacagagctgttttaag
ccagtagagacactgcaggaactagaactgctgacatctgacgttctccgtcctctgatc
tcccatcatgctgttcaagctctgatcaagaacctaaaatcatcgtcagttgtgtgtaac
gcccagtcatcccatgtgagccatgaaaccatccccagcctgcctggtttggcctgtcat
ggatggagggatcatccagggctggttgcttccagctctccctttccgctcctcacagga
cttggctttctactagatacaatcatggacatccataaaggactatgctgcaagttcgcc
gatctcctgctgtcagaacccgtgaccggttacctgcgcagttgcagtcaggccacgccg
accctggttctcggccgagcctggctcctccgtcacgagcactatcttctctacctgctg
cttcggctggcgcacagattagttccagtcgaaccacaaatagccaagcacgcctcattg
tatcaccaggtggcgctggttttgttaccgtggttattgcctggcagtgaatccatggca
catgagctgttttccaccatcgtcttcagcaaggattttatatcggagggacacagtggt
gggcctgaggctgtagagctgggggaactcaaacttcaggagcagacagagcacacgtct
ccttctctccagacagtgggagctctgttgcgtgacgcgtgcgtccagcttccgtccata
cgaggatgcttcctcactcacctggctcatttggagccatccgtgctgacgtcccgggac
gctctgctgggccgcagcccatgggtcaaatcccacctcctccctgagctcaccggcccc
atcctgccatctgattggcctttcctcccactggtgagcctctacgagcagacgggcgtg
tctggcagtggagggttggaagtggaggtgcttccgcagggcgcactgcagtctgtgacc
cactgtctgcagtggctgctggtgctggaggtctggagagaggaggcactaaaggtggtc
ccgcctgtcgccaagctcgcccgcctgtcctgtgtgttcctgtgttccagtgacttgttt
cttgagaggcctgtccagaaactgacctggggcttgttccgacttctcaccaggcagtcc
aggctagactctttggaccttaatgttcctcctccaggcctggcctcgtttcaggacttg
tacctcgcgctcctgacccagtacgaagccgtgtctttcggagaccggctgtttggctgc
tggctccttctgccgctgcagaggcgttacagcgccaccatgaagctggctgtgttcgga
gagcacgtggggatgctgaggtcactgggggtcacgattgaacagctctccatcccaatc
gaacggttcacctctcctgctgaggactccctccctttactccgcctctactttcgttct
ttagtaacggggacgctggcacctcgccggtgtccggtgctgtatgtggtcgccttgtct
cacgtcaacgccttcatattctctcaggatgctgcagcccaggaagttgaaacggctcga
cagagtatgctgaggaaaatctactacctgactgatgaggtgttgaaaacccacctgctg
ctcttccgtctgccacagcggcactcggagtttggcttcgatgtgtacgaccagctgcct
cccatcagggccaaacggctggagaacatcctccaaacgcaggaaagctccagtgaccaa
agagactga
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