Takifugu rubripes (torafugu): 101066409
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Entry
101066409 CDS
T02386
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03013
Nucleocytoplasmic transport
tru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101066409
03015 mRNA surveillance pathway
101066409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101066409
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101066409
mRNA cycle factors
P-body specific factors
101066409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
PagP
Motif
Other DBs
NCBI-GeneID:
101066409
NCBI-ProteinID:
XP_011605288
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All DBs
Position
1:complement(15286380..15290244)
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AA seq
461 aa
AA seq
DB search
MRSEKEPMTVGKEKSVVEIQFRDIPGEQENTSNNTKQKEEKKEVFTKVVLRRLPPNLSKD
QLEEHLSPLPPFDYFEFFPADQSLYPHLFSRAYINFKNPEDILLFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYKRFLENISCDEEKSMANPETLLGEI
EAKTRELIARRTTPLLEYIKNKKIEKQRLREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSEKDIKIKLLKKSDREEDVDSDRVKDKSDNGETDRGKWDKTGGQMKSK
DSKEKGQADSDKEQREQHSRRQREKDHRGKDDERKRQRHHYDFDKFMRHKEETRWGKGYC
HDRAKKDGHHHAFSYCPDGGDKLGKDDREDLGNRKERLRNKVSEKDRPAMQLYQPGARNR
KRISSAGKGFDCIPVNPPAVTDYCYEVATLETGLEKNKDVQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggaaccgatgactgtggggaaggaaaaaagcgtcgtggagatacag
ttcagagacattcccggagagcaggaaaacacctctaataacacgaagcaaaaagaagag
aaaaaagaggtttttacgaaggtggtgcttcgaagacttccaccaaatctgtcgaaagac
cagctggaagaacatctaagtccgctccctccttttgactattttgagttttttccagca
gaccagagtctttacccacacttgttctccagagcgtacatcaactttaaaaaccctgag
gatatcttgttgttcagagaccggtttgatggttacgtcttcattgacaacaagggtcag
gagtatcctgctgtagtggagtttgcccccttccagaaaatttccaagaagaagcttaaa
aagaaagatgccaaagccgggagcatcgaagaagacccagaatacaagcggttcctggag
aatatctcctgtgatgaggagaagtcgatggccaaccctgagactctgctcggagagata
gaggccaagaccagagagctcatagccagacgaacaacaccgctgttggaatacattaaa
aataagaagattgagaaacaaagactgagggaagagaagcgagaagagagaagaagacgg
gagcttgaaaagaaacgacaaagggaggaggaaaagaggaagcgaagagaggaagagaga
cgcaagagaaaggaggcagagaagcaaaagaaattgtctgagaaagatattaaaatcaag
ctccttaaaaagagtgacagggaggaagatgtggattcagaccgcgtgaaggataaaagt
gacaatggggagacagacagaggcaaatgggacaaaacgggaggacaaatgaagtcaaag
gactccaaagaaaaaggtcaggccgacagcgacaaggagcaacgagagcagcatagtcgc
aggcagcgagagaaggaccatcgaggcaaagatgatgagaggaagcggcagcgccaccac
tacgactttgacaagttcatgcggcacaaagaggagaccagatgggggaagggttactgt
cacgaccgcgccaagaaggacggacatcatcacgctttttcttactgtcccgacggtgga
gacaaactgggaaaggatgacagggaggatttgggtaacaggaaagagcgcctccgaaac
aaggtgagcgagaaggatcgccctgccatgcagctttatcagccaggtgcacgtaacagg
aagcgcattagttctgcaggcaaaggcttcgactgcatccctgtgaacccgccagcagtg
acagactattgctatgaggtggccacgctggaaacaggactggagaagaacaaagatgtg
cagtga
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