Takifugu rubripes (torafugu): 101068167
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Entry
101068167 CDS
T02386
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X3
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tru01002
]
101068167 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101068167 (usp47)
Enzymes [BR:
tru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101068167 (usp47)
Peptidases and inhibitors [BR:
tru01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101068167 (usp47)
Ubiquitin system [BR:
tru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101068167 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
101068167
NCBI-ProteinID:
XP_011608561
Ensembl:
ENSTRUG00000017493
LinkDB
All DBs
Position
13:complement(18997996..19010286)
Genome browser
AA seq
1368 aa
AA seq
DB search
MEMVPSEETQFVPKEIHNAAEEPRALCIIQDTTNARTVTERLTLNLPASTPLSKLHEDVA
HKAGYVTGTFELTWGNAPNTAPLDHRSEMSLSDSGFEPGGKRNFLHITDKDGEQPQLASD
ESGAADSSGLDDSSQERFIGPLPREGSVGCSGDYSSPSYSYSSILTKSDTGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTVQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCQKKCDARK
GLRFLHFPYLLTLQLKRFDFDYNTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTNNADRMLKPKSLPTFELFSVMVHSGS
AAGGHYYAHIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLSVEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLREATEMAYKLMELEGLVTLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRRADQVFQPYKPGEVMVKVHVVDLESETIAASVSVRAYLN
QTVTEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSIS
SDHQVTFSDSLLWKLLDRHGNTIRLLVLLPEQSPGTSTNRTVCQKVGVDSDPSLDGSKGN
RKSVEAILEESTEKLKNLSLQQQQQQQQQQGSSTSDSQKSSDASDFEHIESPTQDADSNS
LLGEAADNRELENRIRMAGSSGASSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHS
SDTLCNADSGPLALANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKG
EAQYLYFRTEPCSQSDSTCDAQKCLVVYVDKRITLAAFKQNLEPYVGVPSAQFKVFRVYA
NNQEFESIRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEAEPCKFLVDTVFA
KGMTVRQSKEELLPLLKEQCKLDLNIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWE
VFLEVLNESEKMKSMSQLAVLTRRWSPSTMKLGPFQEVILENSSVDELKEKLSEMSDITL
ENLDFAKGRGTFPCDISVLEIQQDLDWNPKVSTLNVWPLYICDDGAVVFYRNSTEEPMEL
SEDERSELMKRESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtgcctagcgaggagacccagttcgtacctaaagagatccacaacgctgcc
gaggagcctcgtgcgctgtgcataattcaggacaccaccaacgcgaggacggtcaccgag
cggctcaccctgaacctgcccgcctccacccccctgtccaagctccacgaagatgtggcc
cacaaagccggatacgtcacgggcacctttgagctgacctggggaaacgcacctaacacg
gcgccgctggaccaccggagtgagatgtccctctccgattctgggttcgagcccggtggc
aaaagaaactttctccacattactgacaaagatggagaacagccccagcttgcatctgat
gaatcgggagctgctgatagcagcgggctggatgacagctcccaggagcgcttcatcggg
cccctcccccgagaaggctccgtaggctgcagtggtgattacagcagtccatcctactct
tactcgtctattctcaccaaatctgatacaggttacgtcggtctggtcaaccaggctatg
acctgttatctcaacagccttctgcagactctgttcatgactccagaattcagaaacgca
ctctacaattgggagtttgaagagtctgaggaggatccagtcaccagcatcccttaccag
ctgcaaaggttgtttgttctcctgcagaccagtaagaaacgggcaatcgagaccaccgac
gtaacgcggagctttggttgggacagcagtgaggcttggcagcagcacgatgtccaggag
ctgtgtagggtcatgtttgatgccctggagcaaaagtggaagcagacagtgcaggctgac
ctgatcaaccagctgtaccaggggaagttaaaagattacgtgcgctgtctggaatgtggc
tacgagagctggaggatcgatacttacctggacatccctctggttatcagacccttcgga
gccagccaggcttacggcagtgtggaagaggctttgcaggcatttatccaaccagaaact
ctggatggacccaaccagtacttctgcgagcgttgccaaaagaaatgcgatgctcgaaaa
gggctgagattcctgcactttccctacctgctgacgctccagctgaagcgctttgatttc
gactacaacactatgcatcgcatcaagctcaacgaccgcatgaccttccccgaggagctc
gacatgagccccttcatcgacgtggaagatgagaagtcgcctcagacggagagctgcact
gatagtggggccgagaacgaaggcagttgccacagtgaccagatgagcaacgatttttct
acggatgattgtgtggatgaaggcatctgtttggacagcaccaacaatgcagacagaatg
ctgaagccaaagagtttgccgacatttgagctgttctctgttatggtccattctgggagc
gctgctggtggacattactatgcccacatcaaatccttcagtgatggccagtggtacagt
ttcaacgatcaacacgttagcaagatcactcaagacgatatcaggaagacatatgggggg
tcctcagggagcagaggttattactctagtgcctttgcaagctctacaaatgcatatatg
ctgatttatagattgaaagacccctcaaggaacgcaaagtatttatctgtggaagacttc
ccagagcacataaagagtttggttcaaaaggagaaggagtcggaggagcaggagaagcga
cagagagagatcgaaagaaacacttgcaaaataaagctgttctgcatgcaccctgtaaag
atgatgatggagagtaagctggaagtgcataaggacaaaaccctcagagaagcaacagag
atggcctacaagctgatggaactagaggggttggtcacgctggactgttgtcgtttggtg
aagtatgatgagttccacgagtatctggagcgctcatatgaaggcgaggaggacacacca
atgggtcttctcctgggaggagtcaagtcttcatacatgttcgatttgcttcttgagacc
cgcagggctgaccaggtgtttcaaccttacaaacctggagaagtgatggtgaaggttcac
gttgtggacttggagagcgagaccatcgccgcttcagtcagcgtcagagcttatctgaac
cagaccgtcacagaattcaagcagcttattgcacaggctacaggtttatctgcagaaacc
atgcgtgtggtcctggagcgctgttataatgaccttcgccttttgtatgttccaaataag
actctgaaagctgagggcttcttcagaagcaacaaggtttttgtagagagctcaatctca
tcggatcatcaggtcactttctctgactctttattgtggaagctgttggatcgtcatgga
aatacaatccggcttttggtcttgctgcctgaacagtctccaggcacatcgaccaacaga
actgtttgccaaaaagtaggtgttgattctgatccatccttggacgggtcaaagggaaac
aggaaatcagtagaggctatcctggaagagagtacagaaaaactgaagaacctgtctctc
cagcagcagcagcagcagcagcagcagcagggctccagcaccagcgacagccagaaaagt
tcagatgccagtgactttgaacacattgaatctcccacccaagacgcagattccaactct
ttactcggcgaggctgcagacaacagagagctggagaatcggatcaggatggccggcagc
agcggcgcctcctccgaccctgagaaccactttgcctgtgaagagcggtcggactctgag
gtcaacaacgaccgcagcacgagctcggtggacagcgacatcttgagctccagtcacagc
agcgacacactgtgtaacgccgacagcgggcccttggcattggccaatggcctggactcg
cacagcatcacaagtagccgtcgctccaaagcccacgagggcaaaaaggagacatgggac
actgctgaagaggactctgggacagacagtgaatacgatgacaatgggaagagcaaagga
gaggctcagtacctgtattttagaactgagccttgttcacagagtgactccacgtgcgac
gcacaaaaatgtttagtggtttatgtggacaaaaggatcacattagcagcatttaaacag
aacctggagccttacgtgggggtcccctccgctcagttcaaagtgtttcgggtttacgcc
aacaaccaggagttcgagagcatccgactcaatgaaacactctcatcgttctctgacgat
aacaagataacgatccgcctcggaagagctctgaaaaagggtgaatacagagtgaaggtg
taccagctactcgtgaacgaagcagagccctgcaagttcctcgtggatacggtgtttgcc
aaaggcatgactgtcaggcagtccaaggaggagctgctcccgctgctgaaagaacagtgc
aaactggacctcaacattgacagggtccgtctcagaaagaagacgtggaaaaacccaggc
acggtgtttctggactatcacgtttatgaagaagacatcagcatctcctccaactgggag
gttttcttggaagttctcaatgaatcagagaagatgaagtctatgtcacaactcgctgtt
ctgacccggagatggagcccttctacgatgaagctggggccttttcaggaggttatattg
gagaacagcagcgtagacgaactgaaggaaaagctcagtgaaatgagtgacatcactctt
gaaaacctggactttgcaaagggcagaggaacttttccttgtgacatctctgtgctggag
atccagcaggatttggactggaacccaaaggtctcaactctgaacgtgtggcctctgtac
atctgtgatgacggcgctgtggtcttctacaggaacagcacagaggagcccatggagctg
tcggaggatgagcgcagcgagctaatgaagagggagagcagccggctactgaagactggc
caccgtgtcagttattcaccgcgcaaagagaaggccctcaagatctacctggacggaggc
ccggccaaggacccgggacaggactga
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integrated database retrieval system
