Takifugu rubripes (torafugu): 101076089
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Entry
101076089 CDS
T02386
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tru00535
]
101076089
Proteoglycans [BR:
tru00535
]
Extracellular matrix (ECM) proteoglycans
Others
101076089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4992
Motif
Other DBs
NCBI-GeneID:
101076089
NCBI-ProteinID:
XP_011617196
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All DBs
Position
12:complement(8681048..8702390)
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AA seq
1842 aa
AA seq
DB search
MGFWVTLVRCLPLVWLFPHAAHGQVSSPRRFRAKVLSPSQLQVSWKEPKGEFDGYSVIYA
AAPGGDQMEVQVSKQEAKLLIQDFDPSKDYDFQIIAVRGSEQSRPLHAKHEAAQPTAVER
MESQRPQDSGATEEDNSIPAVPEAFMCRTEAIADIVILVDGSWSIGRVNFRLVRAFLESL
VKAFDVDFDRTRIGLAQYSGEPRIEWHLNTHATKGAVMDAAKNLPYKGGNTLTGLALTFI
LENSFRPESGSRPGVPKIGILLTDGKSQDDVTLPAQSLRDAGVEVFAIGVKNADEKELNA
IASSSEDTHVYNVQDFNVMADIVDLLTRTICERMETLYKHMKAAGRVDPAPPPAAVSPPS
DLQVSEVTARSFRVTWTQAPGQVEKYRVVYYPASGGQPDEKVVQGTETSVELDYLNSLTE
YQVAIFSVYRSSASSALRGSATTLELPVVKELELRDITHNNMVVRWEAAEGASGYMILYA
PLTEEDPADEKEVKVDGSVNEVELKDLIPATEYTVTVYAMYGEEASDPVTNQQTTLPLSP
AVDLRLSDVTHNSARITWNSNSNAVNGFRIMYVKADGVQTNEVDVGRVTSWLLRNLTSLT
EYTVGVFALYDEGRAEAVSDSFLTKNVPEPLDFRSSDVTTDSFRVSWEHPASDVVLYRLI
WSPTDGGDPEDVLVDRNINTYVIKGLSPGSEYEVLLAAMYNNEVESDEVTLVESTVTFTT
TIATTTTSTEAPRFAVRNIRIDEKTTFSMRVSWQPVDITNVQHYRLSYSSDGGEEETRVL
PVGQNSLILQPLLADTDYRIHVTPVYHHGDGPTTTQIDRTLPLSAPQNLQVSEEWYNRFR
ISWDAPPSPAVGYRVIYQPLSAPGPALETFVGEGVSSMLLVNVLSGTEYSVKVIASYSTG
PSEPLSGRAKTLFLGVSNLTPYQVRMTSLCAQWQPQRHASTYRLLVESLLNGQKQERRLS
GGTSRHCFTNLTPNTRYKISVYAQLQDGFEGPAVTATEKTLPVPTPPPTRPPTTTPAPTS
PAPKEVCKAARADLVFLVDGSWSIGDDNFLKIIRFLSSTVGALDQIGPDGTQVAIVQFSD
DPRTEFKLNSYSDKERLLEAVSSISYKGGNTKTGRAIQHVKDNIFTEEGGVRKGVPKVLL
VLTDGRSQDDVNKVSKEMQREGYIVFAIGFADADYGELVSIASKPSTRHVFFVDHLDAFK
EIEEELVTFVCEAATATCPSGVMGDSATPGFRMMELFGLEESRYSSVSGVSMVPGTFNSF
PCFHLQADAFLAQPTRFIHPEGLPSDYTITLLFRLLPDTPEEPFALWEVLDKNQEPLVGV
IVDNGGKTLTFFNNDYKGEFQTVTFEGPEIQKLFYGSFHKLHIAISKTSAKVVIDCRMVA
EKSINAAGNISRDGVVVLGRMVRSRGNKDNSAPFQLQIFDIACSTLWASRDKCCELPGLR
KEADCPAMPKACTCTQDSKGAPGPPGPPGGPGIRGARGDRGEPGPVGPAGPVGETGVPGP
QGPQGPQGPSGRSIMGPAGSPGERGQKGEPGQQGAQGVPGRAGAAGRDGPPGPRGLSGKD
GPQGRPGPSGTIGTPGAPGAQGNTGPTGKQGELGPPGLPGGKGEKGERGDVQSTASVQAI
ARQVCEQLIQSHMARYSAVLNHVPSPPVSIRTVPGPPGEPGRPGSPGTQGEQGPPGRPGF
PGQNGQNGQPGERGTPGEKGEKGSQGVGLQGPRGPSGPPGVPGQGRPGSQGPSGRPGNPG
PPGRPGVPGPVGSSGPPGYCDPNSCVGYNVGEDVTDGGAVPPVQLPANIFPNYGEVEEDD
PYRYYQPNYPAPRPVAPDDPALSPDDTDAYRGVRSVEGARGG
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggggttctgggtcacactggtccgatgtctgccgcttgtctggctctttccacacgct
gcacatggccaagtttcgtcaccacggcgtttccgtgccaaagtcttaagcccctcccag
ctacaagtgtcttggaaagagccaaagggggagtttgatggctacagcgtgatttatgca
gcggcgccaggtggggatcagatggaggtccaggtatcaaagcaggaagcaaagctactc
atccaggatttcgacccttccaaagactacgactttcagatcatcgcagtgagaggaagt
gagcagagcagacccctgcacgccaaacatgaagcagctcagccgactgcggtggagagg
atggaatcccagaggcctcaggacagcggcgccactgaggaggacaacagcatcccagca
gttccagaagcatttatgtgcaggaccgaagccatcgcagatattgttattctggtggac
ggttcctggagtatcggacgggtcaacttcaggttggtcagggccttcctggagagcctg
gtcaaagccttcgatgtggactttgataggaccaggattggtctggctcagtacagcgga
gagcccagaatcgagtggcacctgaacactcatgccaccaaaggggctgtgatggacgcc
gccaagaacttgccatataagggagggaacacgctgacaggtttggctctgacctttatc
ctggagaacagcttcagaccagagtccggatccagacccggcgttcccaagataggaatc
ttgctaaccgacggaaagtcgcaggacgatgtgactctgcccgcacagagcctgagggat
gctggggtggaagtgtttgccatcggtgtgaagaacgcggacgagaaagagctgaacgcc
atcgcctcatcctctgaagacactcacgtctacaatgtccaggactttaatgtgatggcc
gacatcgtggacctcctcaccaggaccatctgtgagcggatggagacgctctacaagcac
atgaaagctgcaggtagagtcgaccccgcccccccacctgccgctgtgtctcctcccagt
gatctgcaggtgtcagaggtcacagctcgcagcttccgtgtcacgtggacgcaagcgcca
ggtcaggtggagaagtaccgcgtggtgtactaccctgccagtggaggacagcctgatgag
aaggtggttcaggggacagaaaccagcgtggagctggactacctgaactctctaaccgag
taccaggtcgccatcttctccgtgtaccgcagctcagccagctcagccctcagagggagc
gccaccacgttggagctcccagtggtgaaggagctggagctgcgggacatcactcacaac
aacatggttgttcgctgggaggcagccgaaggggcttctgggtacatgatcctctacgcc
cccctaacggaggaagaccctgccgatgagaaggaggtcaaggtggatggctcagtgaat
gaggtggagctaaaggacttgatcccggccacggagtatacggtgactgtgtacgccatg
tatggcgaggaggccagtgaccctgtgaccaaccagcagacaacacttcctctgagtcca
gcggtggatctacgcctttctgatgtgacccacaactctgcacggatcacctggaactcc
aactccaacgccgttaacggcttccgcatcatgtatgtgaaggcggacggtgtccagacc
aacgaggtggacgttggccgtgtgaccagctggctgctgaggaacctgacgtctctgacg
gagtacacagtcggagtgtttgccctgtatgatgagggacgggcggaggccgtgagcgac
agcttcctcacaaagaacgttccagaaccgctggacttcaggagcagtgacgtcaccaca
gatagcttcagggtgtcctgggaacacccagccagcgacgtggtgctgtaccgactcatc
tggtcgcccacagacggaggagaccccgaggatgttctggtggacagaaacatcaacacc
tatgtcatcaaaggactcagccccggttctgaatacgaggttcttctcgctgccatgtac
aataatgaggtggagagcgatgaggtcaccctggtagaatccacagtcacgtttacaaca
actattgctacgacaaccaccagcacagaagctcctcggttcgctgtgaggaacatcagg
atcgatgagaagaccacgttcagcatgcgtgtgtcctggcagcccgtcgacatcacaaat
gttcaacattatcgactcagctacagcagcgatggaggggaagaggagacgagggttctt
cctgttggccagaacagcctgattctgcagcctctgctggcagacacagactacagaatc
cacgtcacaccagtgtatcaccatggagacgggccaacaaccacgcaaatcgaccgaaca
cttcctctgtcggctccacagaacctgcaagtatctgaggaatggtacaaccgcttcagg
atcagctgggatgcgccgccgtccccggcagtgggctacagggtcatttaccagccattg
tctgctccggggccggccctggagactttcgtgggggagggcgtgagctccatgctgctg
gtcaacgtgctgagcgggacagagtacagcgtcaaggtcatcgcctcgtacagcaccggg
cccagcgagccgctgtcgggcagggccaagaccctgtttctgggggtgagcaacctgacg
ccgtaccaggtgaggatgaccagcctgtgcgcccagtggcagcctcagcgccacgccagc
acctacaggctgctggtcgagtccctgctgaatggtcagaagcaggagcggaggctgagc
ggagggaccagccgacactgcttcaccaacctgacgcccaacacgcgctacaagatcagc
gtttacgctcagctgcaggacggcttcgagggacccgccgtcaccgccaccgagaaaaca
ctgcctgtgccgacgccgccccccaccagacccccgaccaccacgccggcgcccaccagc
cccgcccccaaagaggtgtgtaaggcagccagagccgacctggtcttcctggtggacggc
tcctggagtatcggtgatgataacttcctgaagatcatccgcttcctgtccagcactgtg
ggggctctggaccagattgggccagacggcacacaggtggcgatcgtccagttcagtgac
gacccccgaacagagttcaagctcaactcctacagcgacaaagagcgtctcctggaggcc
gtcagcagcatctcctacaagggaggaaacaccaaaacaggtcgggccatccagcacgtg
aaggacaacatcttcacagaggagggcggggtcaggaaaggtgtccccaaagttctgctg
gtgctgacggacggccgatctcaggatgatgtcaacaaggtttccaaggagatgcagaga
gaaggctacatcgtgttcgccatcggtttcgccgacgctgattacggcgagctggtgagc
atcgccagcaaacccagtaccagacacgtcttcttcgtggaccacctggacgccttcaaa
gagattgaggaggagctggtgacttttgtgtgcgaggctgctacggccacgtgtccgtcg
ggggtaatgggcgacagcgccactccaggtttcagaatgatggagctgttcggtctggag
gagagtcgctacagcagcgtctctggtgtctccatggtacctggaaccttcaacagcttc
ccctgtttccacctgcaggctgacgccttcctggctcagcccacgaggttcatccaccct
gaagggttaccctcagactacaccatcacgctgctcttcaggcttctgcctgacacccca
gaggaacccttcgccctctgggaagtcctcgacaagaaccaggagccgctggtgggagtc
atcgtggacaacggagggaaaactctgaccttcttcaacaacgactacaagggagagttc
cagaccgtcaccttcgaaggacccgaaatccagaagctgttctacggcagcttccacaag
ctccacatcgccatcagcaaaacgagcgccaaagtggtgatcgactgcaggatggtggcg
gagaaaagcatcaacgcagcggggaacatcagcagggacggggtggtggttctgggcagg
atggtccgttccagagggaataaagacaactctgccccgttccagctccagatcttcgat
atcgcctgcagcactttgtgggccagcagagacaaatgctgcgaacttcctggactgagg
aaggaggccgactgtccagccatgcccaaagcctgcacctgcacccaggacagcaaaggt
gcccccggcccccccggaccaccaggcggtccagggatcagaggagccagaggagaccgt
ggagagcccggtccagtcggtccagctggtccagtaggtgaaactggtgttccaggacct
caaggacctcaaggcccccaaggcccgagtggtcgctccatcatgggcccagcaggaagt
ccaggagagcgaggacagaagggtgagccaggacagcagggcgcacagggggttccaggt
cgagctggagctgccggcagagacggacctccaggaccccgaggtctgtcaggcaaagac
ggcccccaaggcagaccaggtccatccggaaccatcgggactccaggagcaccaggggcc
caaggtaacacgggccccactggcaaacagggagagctgggtcctccgggtctaccagga
ggtaaaggagagaagggtgaacggggtgatgtccagtccacggcgtcggtccaggccatc
gcccggcaggtgtgtgagcagctcatccagagtcacatggctcgctacagcgccgtcctg
aaccacgttcccagtccaccagtgtccatccgaactgtgccaggaccaccgggagagcct
ggcaggcctggatctccagggacccaaggagaacagggaccacctggaagacctggcttt
cctggccagaatggacagaatggtcaaccgggagaacgaggcacacccggagaaaagggt
gaaaagggatctcagggtgttggactccaaggccccagaggaccatcaggaccacctggt
gttccagggcagggaagacccggcagccaaggtccttcaggccgacctgggaatccagga
ccccccggacgacccggagttcctggacctgttggctcttctggacctcccggctattgc
gatccaaactcgtgtgtgggctacaatgttggagaggatgtcactgatggcggcgctgtc
cccccagtccaattgccggccaacatcttcccgaactacggcgaggtggaggaggatgac
ccgtaccgatactatcagcccaactacccagcacctcgtcccgtggcacccgatgaccct
gcactgtccccagacgatactgatgcctatcgtggtgtacgcagtgtggagggggcgcgt
ggaggctga
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integrated database retrieval system
