Takifugu rubripes (torafugu): 101079455
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Entry
101079455 CDS
T02386
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101079455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101079455
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
101079455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
DUF4757
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
101079455
NCBI-ProteinID:
XP_011608411
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All DBs
Position
13:17067936..17086159
Genome browser
AA seq
1246 aa
AA seq
DB search
MEWRQQSSVSCAHAFIEAQRWIEEVTGKWFGCNDFRAALENGVLLCDLINKLKPGIIKKV
NRRSTPIAGLDNVNVFLKACGKLGLNVSQLFDPGDLQDLSTRVTLRHNESKRRLKNVLIT
IYWLGRKAHLDAFYSGPQLNFKAFEGLLGLALSRALDEGANLKDGWYPDGEEDPQPRRRS
TAQTSVDSGESPRNLHPSSEGCESDAEAEQVFKMETAQLSPQRNRGRIPLPPPQRKQSLE
NGQYCTGPLARANTRQVTPGRPVQVNPGWIWSKSLSDIPMVYPVRKVPRGRIGKGVGRGD
DGREWNSDKDLCTAVAEDGDAQWQDDLTEWKNRRRSTKSDLRRKSQDREHVINQMTNSAR
TNFERTEAGVPLERAQQSPSSNGPAPRAASSSSPSKPSGFDLQPRTRALLTRSYVTEVTL
SPAASVVPLSSTNTQRATAGAMPASDGAILEEGRFASLASNGAGVTTPSLEFPFSSQTQV
KGQISLTPAQPSSKRAQPESGPNQISSSATTIQLNGPFDRDPSEFCADPKVHQAPVYTPE
NRQNLETSGTSVERGPGPQVSGRYKYLAQTGSWARSASLPRGYRRSEGSCRLSSAITARP
FGNKQSRVSSLPRLHNVDDNQGPLSKRDKDGSPSPPFRPSLKRQAASASLKVSPPAPSRQ
NNGNQTAVTDATPFQTPPPPQVCSSLQDNPGKSPTVLSNPCSDHTQVGHSFMRVSLTLKP
NSRSDFGFQTRRDSRGATVQFIQPGSPAELCQLRVDDEIVTLNGVPVAHMSSSEWMEKMT
SSLRAGSLTMDVRRYGNKDWSSSVGSRHKEPGQSRTTLNLTAAAPALIGRLPAHGAGAEI
PAGKASELSGQTDGASGHLELRSAGDARSGARQANGGALSPVQVAHGKVALGEFADNHRT
ARSEVDYNTIIRINHRRRAEFFQEKGGSESAISDLQVPSLSPSSSSWMWNYEEERRRQQK
WQEEQERLLQEKYQRDQERLEAEWQRAQQDAMEEEHREDGKVIASEASGGGRGQLMNGRT
SRLSEQDQTPHSVTVTSDPRCDAQAAQNGRNIKGWAEECCDFARLSQSHRAKSMSTPSLA
AAPKQTRGEERKRREPSVSKVEQQRQQILEEMKKRTQLLTDNSWIRQRSSSVYKEPIYVP
LKRFESLDNLDAFQHSSALQNYPRPHSAAAGYYSPSRNPSRYSTGSVLPRTNDPTHLIRY
ASSSRAATGLPADLRPGSETQPHTAGSAISSPSTLLTSPHDQRVLL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtcagcagagcagcgtcagctgtgcacacgctttcatcgaggctcaacgc
tggattgaggaagttacgggaaagtggtttggttgtaacgacttccgcgcggccttggag
aacggagtcctgctctgcgacctgatcaacaagttaaaacctggaatcattaagaaagtc
aacagacgctctactcctatcgctggtctggataatgtcaacgtgttcctgaaagcctgc
ggcaaactgggcctgaacgtgtcccagctcttcgatccaggagacctgcaggacctgtcc
acccgcgtgacgctcaggcacaatgaaagcaaaagaagactcaaaaatgttctgataacg
atctactggctgggtcggaaggctcatctcgacgccttttacagcggtccgcagctcaac
ttcaaggcctttgaagggctgttggggttggccttgtccagggccctggacgaaggcgct
aacctgaaagacggttggtacccagatggagaggaagacccgcagcccagacgcagaagt
acagcgcagactagtgtggacagtggagagtctcccaggaacctccacccaagcagtgaa
ggttgtgaaagcgacgcagaagcagagcaggtattcaagatggagacggcacagctctca
ccccagcggaacagagggcgtatcccactgccgcctcctcagagaaaacaaagtctggag
aatggccagtactgtaccggcccactagccagagctaatacaaggcaggtcacgcctggg
agaccagttcaggtcaaccccggctggatctggagcaaatcgctcagtgacatcccgatg
gtttaccccgtgcgtaaagttccccgtgggcgcatcggtaaaggtgtgggtcgaggtgac
gacggaagggagtggaatagtgacaaggacctgtgcacagccgtggctgaagacggcgac
gctcagtggcaggacgatctgaccgagtggaagaaccgtcgaaggagcacgaagtcggac
cttcgcaggaagtcgcaggacagggagcacgtcatcaaccagatgaccaacagcgctcga
accaactttgagaggactgaggcgggagtcccactggagagggcccagcagtctccaagc
agcaacggccctgccccccgcgctgcctccagctcgtctccatcgaaaccatccggcttc
gatctgcagcctcgcactcgagcgctgttgacccgcagctacgtcacagaggtaaccctg
agccctgcagcttcagttgtccctctcagcagcaccaatacccagagagcgacagcggga
gccatgcccgcctctgatggcgccattttggaagagggccggtttgcgtccttggcttca
aatggagcaggagtcaccaccccttctctggaattcccattcagttcccagacgcaggtc
aaaggtcagatcagcctgactcctgcgcagccctcatctaaacgcgctcagcctgaaagc
gggccaaaccaaatctcctcctcggccacaactatacaactaaacgggccctttgacagg
gatccttctgagttttgcgctgatccaaaagttcaccaggcaccagtttacactccggag
aaccgccagaaccttgagacatcaggaacatctgtggaacgtggcccagggccgcaggtc
agcggccgctataagtatttagcccaaacagggtcatgggcccgctcagccagcctgcca
cgtggctaccggaggtccgaaggctcgtgccgtctctcctccgccatcacggcgaggccc
tttggcaacaagcagtccagggtgtcctcgctgccacgactgcataacgtggacgacaac
cagggaccgctgtccaaacgagacaaagacggatctccatccccacccttccgaccatcg
ctcaaaaggcaggcggcaagcgccagcctcaaggtttcaccgccagctcccagcagacag
aacaacgggaaccagacggcggtgacggatgccacgcccttccagactccgccgccgccg
caagtttgctcgagcctgcaggataatccgggaaaatctccgaccgtcctgtctaacccc
tgcagtgaccacacacaggtgggtcacagtttcatgagggtgagcctcactcttaaaccc
aacagcaggtcagactttggtttccagactcgacgggactccagaggggccacagttcag
ttcatccagcctggcagtccagcagagctctgccagctgcgcgtggatgatgagattgtc
actcttaatggagttccggtggcacacatgagctcctctgagtggatggagaaaatgaca
tcgtccctacgcgcgggcagtctgaccatggatgttcggcgctatggcaacaaggattgg
agcagcagtgtggggagccgtcacaaagagccaggccagagcaggacgaccctcaatctg
accgccgccgcacccgctctgataggtcgcctccccgctcacggcgccggtgccgaaatc
ccagccgggaaagcgtccgagctcagtgggcagacagacggtgcgagcggtcatttagag
ctcagatcagcaggggatgcgcgcagtggcgcacgtcaggcgaacggtggcgctctctcg
ccggtgcaggttgcacacggtaaagtggcgctaggagagtttgccgataaccacaggaca
gccagaagcgaagttgattataacactatcatcagaattaatcataggaggagggcagag
tttttccaagagaaaggaggttcagaatctgccatatcagacctccaggtgccgtccctc
agcccctcctcatccagctggatgtggaactatgaggaggaacgcaggcgtcaacagaag
tggcaggaagagcaagagcgcctcctacaggagaaataccagcgagatcaggagaggctg
gaggcagaatggcagagagcacaacaagacgccatggaggaggaacaccgggaagatggg
aaggtcatcgcctctgaggcgagcggaggggggaggggccaactcatgaacggacggacc
agtaggctcagtgagcaagatcagaccccccacagtgtcaccgtgacctccgaccctcgc
tgtgatgctcaggcagcacagaatggcaggaacatcaaaggctgggctgaggaatgctgc
gacttcgctcggctgtctcagtctcacagggcaaagtctatgtcgacgccatcattagct
gctgcccccaaacagaccagaggtgaggagaggaaacggcgcgagccgtctgtgtccaag
gtcgagcagcaaaggcagcagattttggaggagatgaagaaaaggacccagctgctgacc
gacaacagctggatccgtcagcggagcagcagtgtttacaaggagcccatttatgtccct
ctgaaaaggtttgagtccctggacaacctggatgcctttcaacactcgtccgctctgcag
aactacccccgcccacactccgccgccgccgggtactacagccccagcaggaacccttcc
cgttacagcaccggctctgttttacctcggacaaatgatcccactcacctcatcaggtat
gcgtccagttcgcgggctgccacaggcctcccggcagacctgagacccgggtccgaaaca
caaccccacactgcgggctctgctatttccagcccaagtacactgctgacctctccacat
gaccagcgtgtgttactctaa
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