Tropicibacter oceani: QF118_01725
Help
Entry
QF118_01725 CDS
T09169
Name
(GenBank) alginate lyase family protein
KO
K01729
poly(beta-D-mannuronate) lyase [EC:
4.2.2.3
]
Organism
try
Tropicibacter oceani
Pathway
try00051
Fructose and mannose metabolism
try01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
try00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
QF118_01725
Enzymes [BR:
try01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.3 mannuronate-specific alginate lyase
QF118_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
WGW04284
LinkDB
All DBs
Position
complement(340360..341376)
Genome browser
AA seq
338 aa
AA seq
DB search
MSARLPLLTAGLVVAAQMGLAQEGGCPAAPEPVLGLSFDSRYQGSDEARATVNPETEAEA
EAALKPLDDFIRDLSVKLGSMLEQPAEDRREAANCLIGQIAQWARADALSDQGSETTQLT
IGARLASFAIIAGKAMPHTTDYAGLDDIRGWLTRRMNEQMLFWEVAPPGAASGNLRAWAG
LAGAATADLTGDVVLRGWSTWSTAYVLCLANPDGSLPQEMTRGKYALHYQLHALSPLVTS
VLMLERQGVSLMDRCDGALDRAVAFALSDLDSGDRTRQITGQTQSFFDGTARLEDFQLAW
LEAYLVLNSDPAIENLASKRRPLSFSKLGGNQTLLWKP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccagattgccattgttgaccgccgggcttgtcgtcgccgcgcagatgggtctt
gcccaggagggggggtgccccgcagcgccagagcccgttcttggcctgtccttcgacagc
cgctaccagggcagcgacgaggcccgtgccaccgtgaacccagaaaccgaggccgaggcc
gaggccgccctgaaaccgctggacgatttcatccgtgatctttcggtcaagctgggcagc
atgctggaacagcccgccgaggaccgccgcgaggcggccaattgcctgatcggtcagatc
gcgcaatgggcgcgggccgatgcgctttcggaccaggggtcggaaacgacccagctgacg
atcggcgcgcggcttgccagctttgcgatcatcgccggcaaggccatgccgcataccacc
gattacgccgggctggacgacattcgcggctggctgacgcgtcgcatgaacgaacagatg
ctgttctgggaggtcgcgccgccgggcgctgcctcgggcaacctgcgggcctgggccggg
ctggcgggggccgccaccgcagacctgaccggcgatgtcgtcttgcgcgggtggtccacc
tggtccaccgcctatgtcctgtgcctggccaaccccgatggcagcctgccccaggagatg
acgcgcggaaaatacgcgctgcactaccagttgcacgcgctgtccccgctggtcacctcg
gtcctgatgctggaacggcagggggtgtccttgatggatcggtgcgacggggcgctggac
cgcgccgttgcctttgccctgtccgatctggacagcggcgacaggacccggcagatcacc
ggtcagacccaaagtttttttgacggcaccgcccgtcttgaggatttccagctggcttgg
ctcgaggcctacctggtgctgaattccgatcccgcgatcgagaacctggccagcaaacgc
cggcccctgtccttttcaaagctggggggcaaccagactctgctctggaaaccctag
DBGET
integrated database retrieval system
