Thiothrix subterranea: HMY34_16175
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Entry
HMY34_16175 CDS
T07831
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00550
Peptidoglycan biosynthesis
tsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMY34_16175 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsb01003
]
HMY34_16175 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsb01011
]
HMY34_16175 (pbpC)
Enzymes [BR:
tsb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HMY34_16175 (pbpC)
Glycosyltransferases [BR:
tsb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HMY34_16175 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
tsb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HMY34_16175 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
PKD
Motif
Other DBs
NCBI-ProteinID:
QQZ30173
LinkDB
All DBs
Position
3278806..3281142
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AA seq
778 aa
AA seq
DB search
MRTYLIRAAGSALLCLLLFVLADWWWPLPEPERVRSVLILAQDRTPLRAFADNEGVWRYP
VTLAEVSPLYVEALLTYEDRWFYQHPGINPFALVRAGWQWLQGGRVISGGSTLTMQVARI
LDPHDRTVSGKIRQMFRALQLEWHYSKTDILTFYLNLAPFGGPIEGVQTASFAWLHKPAL
ALSHAEAALLAVLPQAPSRLRPDRSPELAQRYRDKVLRRMATQGVWSQDTVVDAMVEPVM
KLRFQQPMKAPLFAERMKIRAFANKVSRLQTTLDANIQWAVDNVLRTRVNSLPEKASVGV
LVLENHTGYVRAYAGSADFHNAERFGHVDMVQAVRSPGSTLKPFLYGMALDDGLLHSASL
LSDVPLKLNDYAPQNFFRHFSGAVSVMQALQQSLNVPAVDILQRLTPTNFVARLRHGGVV
ISFPEHAEPNLSVILGGAGTTLEDLVRGFSALGRGGISIKPRFVADDPLEERRMLSEGAA
WIIQEILRAIPPPEGSINAAGVAWKTGTSYGFRDAWAIGVSDYYTVGVWTGRPDGTPLPG
SLGVAAAGPILFDVFRALPKQSGMNARRRPANVTQEDICWPLGESAAQTAPEHCHVRQQA
WILNGNVPPTLPHFQHYSWSAGLQTYWLNPATGLRVTSACNVPARMARQVAQWPLELQPW
LATTLLEKIRLPAFDSSCPPGSAYQGGKQLAVRHLDDSTRLYLPKVAAGQPNNGVTLDLL
ADGGEDQYFWLVNGEPVGVDTARSGLRHTFTRAGDYELTVFDTAGAVDKVSIRVISQP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacctatctgataagggcggctggctcggcgctgttgtgcctgttgctgtttgta
ttggcggattggtggtggccgctgccagagcctgagcgggtgcgcagtgtgttgattctg
gcacaagaccgaaccccgttgcgggcttttgcagacaatgaaggcgtgtggcgctatccg
gtgacgttagcggaagtgtcgcctttgtatgtcgaggcattgctgacctacgaagaccgt
tggttttatcagcatcccggcattaatccgttcgctttagtgcgggcaggctggcaatgg
ttgcaaggcgggcgagtgatttcgggtggttcgacgctgaccatgcaagtggcgcgaatt
ttagacccccatgaccgtaccgtgagtgggaaaattcggcagatgtttcgggccttacaa
ctcgaatggcattacagcaagacggatattctgacgttttacctcaaccttgcgcctttc
ggtggccctatcgaaggcgtgcaaaccgccagttttgcttggttacacaagcctgcctta
gcactgagtcatgcagaagcggcattattagccgtgttgccgcaagccccctcgcgtttg
cgcccggatcgctcccccgaattggcgcaacgttaccgcgataaagtcctgcgccgcatg
gcgacacaaggcgtttggtcgcaagacaccgtggtggacgcgatggttgaacccgtgatg
aaattgcgttttcaacagccgatgaaagcgccgttgtttgcggaacgcatgaaaatccgc
gcttttgccaacaaagtgtcacggttacaaaccaccttggatgcgaatattcagtgggcg
gttgacaatgtattgcgcacccgcgtgaacagtttgccggagaaggcttcggtcggggtc
ttagtgcttgaaaatcacacgggctacgtgcgggcgtatgcgggatcggcggatttccac
aatgccgaacgttttgggcacgtggatatggtgcaggcggtgcgttcccccggttcgact
ttgaagccgtttttgtatggcatggcgttggatgatggcctgctgcattcggcgagtttg
ctgagtgatgtgccgctgaaattgaatgattacgccccgcagaattttttccggcatttt
tcgggggcggtgagtgtgatgcaagcgttgcagcaatcgttgaatgtgcctgcggtggac
atcttgcaacgtttgacaccgacgaattttgtggcgcggctgcgtcatggcggggtggtg
atcagttttcctgaacacgctgaaccgaatttgagcgtgattttggggggcgctggcacg
accttggaagatttggtgcggggatttagcgcattagggcgcggcggtattagcatcaag
ccgcgctttgtggcggatgatccgctcgaagaacgccgaatgttgtccgaaggggcagcg
tggataattcaggaaatcttgcgggcgattccgccgccagagggcagtattaatgcagcg
ggtgtggcgtggaagacgggaaccagttacgggtttcgggatgcttgggcgatcggggta
agtgattactacacggttggggtgtggacaggtcgcccagacggtacaccattacccggc
agtttgggggttgcggcggcaggcccgattttatttgacgtatttcgggcattgcccaag
cagtcgggcatgaatgcccgtcgccgtccggcaaatgtgacgcaagaggatatttgttgg
cctttgggggaaagtgcggcgcaaactgccccggaacattgtcatgttcgtcagcaagcg
tggattttgaacggcaatgtgcctccaaccttgccgcattttcagcactattcatggtca
gccggtttgcagacgtattggcttaaccccgccaccggcttgcgggtaacgtcggcttgc
aatgtcccggcgcgtatggcgcgacaagtcgctcaatggccgctggaattgcaaccttgg
ttagccactaccttgttggaaaaaatacgtttacccgcttttgatagcagttgcccgccc
ggtagcgcgtatcagggcgggaaacaattggcggttcggcatttggatgacagtacgcgc
ttgtatttgcccaaagtagccgcagggcaacccaacaacggcgtaacgttggatttgctg
gcggacggtggcgaagatcagtatttctggttggtgaacggcgaaccggttggcgtggac
acggcgcgtagcggtttgcgccacacctttacgcgggcaggcgattacgaattgacggta
tttgacaccgccggagcggtggataaagtcagcattcgcgttatcagccagccctga
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