Tritonibacter scottomollicae: R1T40_20925
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Entry
R1T40_20925 CDS
T09466
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco00521
Streptomycin biosynthesis
tsco00523
Polyketide sugar unit biosynthesis
tsco00541
O-Antigen nucleotide sugar biosynthesis
tsco01100
Metabolic pathways
tsco01110
Biosynthesis of secondary metabolites
tsco01250
Biosynthesis of nucleotide sugars
Module
tsco_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
R1T40_20925 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R1T40_20925 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R1T40_20925 (rfbC)
Enzymes [BR:
tsco01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
R1T40_20925 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOI35353
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All DBs
Position
unnamed2:18677..19225
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AA seq
182 aa
AA seq
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MQIEDTTLPGVKILTPARFGDARGFFSESWNRKRMEEHGIDLDFVQDNHSMSAEVGTIRG
LHFQAPPAAQDKLVRCGQGALFDVAVDIRKGSPTYGAWFGIELTAENGRQLLVPKGFLHG
FITRAPMTEIIYKCTDYYAPDCDGAVRWDSCGIDWGFDGQPLLSQKDAAAPALAEFDSPF
TF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaagacaccacccttcccggcgtgaagatcctgacgcccgcgcggtttggc
gatgctcgtggctttttctccgagagctggaaccgcaagcggatggaagagcacggcatc
gatctggatttcgtgcaggacaatcattcgatgtctgcagaggtcggcaccattcgcggg
ttgcactttcaggccccgcccgcggcacaggacaagctggtgcgctgcgggcaaggcgcg
ctgtttgatgtcgccgtggacatccgcaaaggatctcccacctatggcgcgtggttcggt
atcgagctgacggccgaaaacgggcgccagcttctggtgcccaaagggttcctgcacggg
ttcatcacccgggcgccgatgaccgagatcatctacaaatgtaccgattattatgcaccc
gattgcgatggggcggtgcgttgggacagctgtggcatcgactgggggtttgacggacaa
cccctgttgtcacagaaggacgccgccgcgcctgcgctggcggagttcgacagccccttc
accttctga
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