Treponema socranskii subsp. buccale: HRI97_12065
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Entry
HRI97_12065 CDS
T08383
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk00521
Streptomycin biosynthesis
tsk00523
Polyketide sugar unit biosynthesis
tsk00541
O-Antigen nucleotide sugar biosynthesis
tsk01100
Metabolic pathways
tsk01110
Biosynthesis of secondary metabolites
tsk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HRI97_12065 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HRI97_12065 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HRI97_12065 (rfbC)
Enzymes [BR:
tsk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HRI97_12065 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UTD03952
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Position
2681070..2681669
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AA seq
199 aa
AA seq
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MSFAFNQCSIDGVPIEGLFEIVPKVFGDARGYFFESYSARDFAAAGIDARFVQDNQSRST
KSVLRGLHFQTKHPQGKLVRVISGSVYDVAVDLRNDSPTFGTYCGVVLDGEKQNQFYIPK
GFAHGFYVLSGEAIFAYKCTDFYDPTGEGGIMWNDKTIGIDWERAAPGMTPLLSEKDKKH
PSFDKDTRYFSKDGIWLGN
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgttcgcgtttaatcaatgctcgattgacggagtccctattgaggggctttttgaa
atagtaccgaaagtgttcggagatgcgcgcgggtattttttcgaatcctacagcgcgcgc
gactttgccgccgcagggatcgatgcgcgctttgtgcaggacaatcagtcgcgatcgaca
aagagcgttttgcgcggtctgcattttcaaacgaaacatccgcagggaaaactcgtgcgc
gtcatatcgggcagcgtatacgatgtcgctgtcgatttacgaaacgattctccgactttc
ggaacatattgcggagtggtgcttgacggagaaaagcaaaatcaattttacattccgaaa
ggcttcgcgcacggattttacgtgttgagcggtgaggcgatttttgcgtacaagtgtacc
gatttttacgatcctacaggtgaaggcggtattatgtggaacgacaaaacgatcggaatc
gattgggagcgcgcggctccgggtatgacgccgctcctttcggaaaaggataaaaaacat
ccctcattcgataaagatacacgctatttttcaaaggacggtatatggctcggaaattaa
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