Trichinella spiralis: Tsp_00957
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Entry
Tsp_00957 CDS
T01609
Name
(RefSeq) hypothetical protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribo_biogen_C
RLI
Motif
Other DBs
NCBI-GeneID:
10904863
NCBI-ProteinID:
XP_003376774
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MICSCIQSCGCPGDTVRTIFPITENGRSGFYQVGTSFEKCKDNAEERQSSEDSSSDEDAE
SGRTAIPLAMWDFNQCDVKKCTGRKLVRMGFVKSLRLGSFWSGISLTPTASCCLKPQDRE
IILKYGIAAVDCSWHNIEGTAFGKLKCKHARLLPFLVASNPINYGKSCQLSCAEAFAAAL
FIVGKSIGMLLNRDDRHQCRVAGFKEQSKTVMSKFKWGHGFFNLNGDLLEKYSQCRTVAE
VIKVQSEFLTRQERPTWADDERRSSRRRVESTRVGLLEKSTAAAPRGRGQADNGDLRKGG
RREAGVFRRRIPRSDRSRRVGPSVGQRRRRELFGAPEPTGRIFVHVVHSVRRSDEKLQTL
LRRSTFRRRKAIRQCRTARRRRPDLDAHRKTRRRLRASDGRADHLRTLALQPIPTDASTI
ERAAHLRLCIVGVRCRRVVVAVSLLESWSSKTTWWSTVTTTNNVRADISDAPLVRLLRQL
HLGSGGPGFEVRRVRLRGPPALCRKNSPRLSARFEIRQADVRRRLDHVQHGPPGAGAPRC
RMVRGRDRAPRSRHRRLVPGVRVARADRKVALAVRRRPVVGAPLPGRSRRRPRSDRLVET
LLPTAADPPGDVRRPARAGPRGRRPSRSRPRQAEAGRPSVARHAARRPPGGAGAVRAPPA
PRRRAQRPEPHDRRQFGSHPGVDVDDRQRRRRHF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgatttgttcttgcatacagagttgtgggtgtcctggagatactgtaagaacaattttt
ccaattactgaaaatggaagatccggtttttatcaagtaggaacgagttttgaaaagtgc
aaagacaatgctgaagaacgtcagtcgtcagaagatagttcaagtgacgaagatgcagaa
agtggtcgtacagctattccacttgcaatgtgggatttcaatcagtgtgatgtgaaaaaa
tgcactggtcgtaaattagtcaggatgggatttgtgaaaagcctccgattaggtagcttt
tggagtggaatatcgctcactcctacggccagttgttgtttaaaaccacaagatagagaa
ataatattgaaatatggcatcgcagcagttgactgttcttggcataatattgaaggaaca
gcgttcggtaaattgaaatgcaaacatgccagacttttaccatttctagtagcgagcaat
ccgatcaattatggcaaatcgtgccagttgtcgtgtgcagaagcgttcgcggctgcactt
ttcattgtcggtaagtctattggtatgttgctaaatcgtgatgatcgacatcagtgtcgt
gtcgcaggtttcaaagagcaatcgaaaacagtgatgtcgaaattcaaatggggtcatggc
tttttcaacctcaacggtgatctgctcgaaaagtacagtcagtgcagaacggtggcagaa
gtgatcaaagtgcaaagtgaatttctcactcggcaagaacggccgacgtgggccgatgat
gagcggcgatcaagtcgtcgacgagtcgaatcgactcgggtcggcttattggaaaaatca
actgctgctgctccaagagggcgcggtcaagccgacaatggtgatttgcgaaaaggcggt
cgaagagaggccggcgtttttcggcgccgaattccacggtctgatcggtcgcgacgagtc
ggaccgtctgttggccagcgccggcgaagggagctatttggtgcgccagagccgacgggc
cgaatattcgtacacgttgtgcattcggttcgacggtcagacgaaaaattacaaactctt
ctacgacggtcaacatttcgtcggcgaaaagcgattcgacagtgtcgaacagctcgtcgc
cgacggcctgatctcgatgcacatcgaaaaacacgccgccgactacgtgcgtcggatggc
cgagcagaccatttacgaacactcgccctacagccaattccaacggatgcgtcaacgatt
gaaagagcagcacatctccggttgtgtattgtgggtgtgcgttgtcgccgagttgttgtt
gccgtaagcctgttggagtcgtggtcgtcgaagacaacatggtggtcgacagtgaccacc
accaacaacgtccgtgcagacatttctgacgccccactggtgcgactactgcggcaatta
catctggggtctggtgggccagggtttgaagtgcgaagagtgcggcttcgcggcccaccg
gcgctgtgccgaaaaaactccccaagattgtcggcccgatttgaaatacgtcaagcggac
gttcggcgtcgacttgaccacgttcagcatggcccaccgggtgccggtgccccacgttgt
cgaatggtgcgtggacgagatcgagcgccgcggtctcgacaccgaaggcttgtaccgggt
gtccgggtcgcacgagcagatcgaaaagttgcgcttgcagttcgacgccgacccgtggtc
ggcgcgcctctgcccggccgaagtcgaagacgtccacgctctgaccggcttgttgaaact
ctacttccgactgctgccgatccccctggtgacgtacgccgcccggcgcgagctggtccg
cgcggtcggcggccgtctcgaagccgaccccgacaagctgaagctggtcggccgagtgtt
gcgcgacacgctgcccgccgcccaccaggcggtgctggcgctgttcgcgcgccacctgca
ccgcgtcgccgagctcagcgcccagaaccgcatgaccgacgacaatttggctcgcatcct
ggtgttgacgttgatgaccggcaacggcgccgccgccacttttga
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