Trichinella spiralis: Tsp_01929
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Entry
Tsp_01929 CDS
T01609
Name
(RefSeq) vacuolar protein sorting-associated protein 53-like protein
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_01929
Membrane trafficking [BR:
tsp04131
]
Protein recycling
Others
EARP complex
Tsp_01929
Endosome - Golgi transport
Tethering complex
GARP complex
Tsp_01929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
PRORP
Syndetin_C
COG4_N
Vps54_N
NBD94
DUF4715
Motif
Other DBs
NCBI-GeneID:
10907152
NCBI-ProteinID:
XP_003377745
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
IKWSVDCGIVTDSGCCSCCSSPLKQLTLSDEDFNSMKDELVKRIVIGDSVYRQTSPEEYY
RFRQTNDDAFVIVAAVSSGKHCYMVSNDQLNTHCHKLNPPQRDYFLLWRRMRQILSEQAE
PNAPRHRTLQRTEIEKRMMSGDSEEQKPKWLRVMDLQTPVRFSETVQSALDSVADPEDPF
NKPDFCAISYINHLFPSEPSLAHVGQVMADVQRQIDQVDQEISDILEKQSVAQLDSEALL
EQTKQAMRELFGRIMDIKRQTDMSETTVKEITRDIRQLDLAKKNLTASITTLNHLHMLVS
GLESLESFVNQYMTVPQIKALSDQVNSIRIELADLTTTEFKRYFSGGFKKASGQQQSVPI
EDVCLVLSVLDRTVREGLISWLIDQQLAEYKILFDDTQDDAWLDKIDLRFSWFRDCLIEF
ERKHAALLPAEWDVACKFAAEFFHLTASMLDQVMEKRCVELDAKLVLFAVQRAANFEALM
ARRFPGRAQTLFQSVLVGRFQKRMSIYTASLDKTLTDLIDQLVAKFQQLGPPSAEYGTSA
VPIPTSSDLFVFYKKSIQQLLQLGMNANILVDLSRLFKKYLHEYAQRCGIFDLLILILLY
SVRMILLLLLCRCLTGLLPKIASAHTTTTAGLLQSFLKEGDMPRLSNDEIYLVCCILITA
EFCAETSHQLQEKLKEKAGDLALHEAFDFTNEREMFHGVVSSSVQVLVQDLETACEPALQ
TMTKMQWANVDTVGDESRYVASIRQHLRQCVVRIRDCLGQARKYFMQFCFRFVNAFVPKF
INAILRCRPVSVTGAEQLLLDTHALKTELVNLPVLESAAGRKPPEAFTKLVIKGMTKAEM
ILKLVMAPVDPDPGTFVEHYINFLPESDVVEFQKILDMKSVRKNEQTAIMDIFREKKAAL
DSKNDLNADRGGVASDAALSSGDNSSLDSRIRKLEKLVKKRF
NT seq
2831 nt
NT seq
+upstream
nt +downstream
nt
aaatcaaatggtcagttgattgtggaatcgtaacagacagcggctgttgttcttgttgca
gtagtcctttgaagcagttgacactgtcggatgaagatttcaactcaatgaaagatgaat
tagttaagcgaattgtcatcggtgacagtgtttaccgtcaaacttcaccagaggaatact
accgttttcgacaaacaaacgacgacgcgtttgtgattgtcgctgcggtgagcagcggca
agcattgttacatggtgagcaatgaccagctgaatacgcattgtcataaattgaacccac
cgcaacgggattactttctcctttggcgacggatgcggcagattctcagtgaacaagcag
aaccgaatgccccacgtcatagaacgttgcagcgaactgaaattgagaaacgaatgatga
gtggtgattcagaagagcaaaagccgaaatggcttcgcgtgatggacttgcagacgccgg
tacgtttttccgaaactgtacagtcggcgttggattccgtagccgatccggaagatccat
tcaacaagcccgacttttgtgccatttcctacatcaatcatttatttccatcagaaccga
gtttagcacacgtcggtcaagtgatggcggatgtgcagcgtcagattgatcaagttgacc
aggaaatatcggatatattggaaaagcaaagcgtcgcccagttggacagcgaagcgcttt
tggagcagaccaagcaggcgatgcgagaattgttcggtcgaataatggacatcaagcgcc
aaaccgacatgtccgagacgacggtcaaggagatcacccgcgatatcaggcagttggatt
tggcgaagaaaaatttgaccgcttcgataacgacgttgaatcacctgcacatgttggtca
gtggtttggaatcgttggaaagttttgtcaaccaatacatgaccgtaccgcagatcaaag
ctctgtccgaccaggtgaacagtattcgaatcgaactggccgacttgaccacgactgaat
tcaaacgttatttttccggtggtttcaaaaaggccagcggtcagcagcagtcggtaccta
tcgaagatgtctgtctggtgttgtccgtgttggaccggacggtacgcgaaggtctgatca
gctggttgatcgaccaacaactcgccgaatacaagattcttttcgacgacacccaagacg
acgcttggctggataaaattgatctcagattttcttggtttcgtgattgtttgattgaat
tcgaacggaaacatgccgctctgttgccagccgaatgggatgtagcttgtaaatttgctg
ccgaatttttccacctcaccgcttcgatgctcgaccaagtgatggaaaagagatgcgtcg
agttggacgccaaattggtactgttcgccgtccagagggccgcgaatttcgaagcgctga
tggcgcgtcgttttcccggccgggcccaaactttgttccaatcagttctggtgggtcgtt
tccagaagcgcatgtccatctacacggcatcgttggacaaaaccctgaccgatttgatcg
accagcttgtggccaaattccaacaactcggtcccccgtcggccgagtacggtacttcgg
ccgtacccataccgaccagcagtgatctgttcgtcttttacaaaaagtccattcaacagt
tgcttcagctcggcatgaatgcgaacattctggtcgatttgtcacgtttgttcaaaaaat
atctccacgaatacgcgcaaaggtgtggtattttcgatcttctcatactaattcttctat
attctgttcggatgatattgttgttgttgttgtgcagatgtttaactgggctgttgccga
aaattgccagcgctcatacgaccacaacggccggccttttgcagagctttttgaaagaag
gtgacatgcccagattgtcgaacgatgaaatttatttggtctgttgtattttgattacgg
cggaattttgtgccgaaactagtcatcagttgcaagaaaagttgaaagaaaaagctggcg
atttagctttgcacgaagcgtttgattttaccaacgaacgggaaatgtttcacggtgtag
tgagcagttctgtgcaagtgttggtccaggatttggaaactgcctgcgaaccagctttgc
aaacgatgaccaagatgcagtgggcgaacgtggatacggtcggcgacgagagccgttacg
tggccagtatccgtcagcatcttcgccaatgtgtggtccgcatccgggactgcctcggtc
aggccaggaaatatttcatgcagttctgttttcggttcgtcaacgcgttcgtgcccaaat
tcatcaacgccatcttgagatgtcggcctgtgagcgttaccggtgccgagcagcttctgc
tcgatacccacgccttgaaaaccgaactggtcaatttgccagttttggaatcggcggctg
gtcgtaaaccgcccgaagcgttcaccaaactcgtcatcaaaggcatgaccaaagctgaaa
tgatattgaaattggtcatggctcctgtagacccggatcccggtacatttgttgaacatt
atataaattttctacccgaatcggatgttgtggaatttcaaaaaattctcgacatgaagt
ctgttcgtaaaaatgaacaaaccgcaattatggatatttttcgtgagaaaaaagcggctt
tggattcgaaaaatgacctcaacgccgaccgaggaggagtggccagtgatgcagcgttgt
cgtcgggcgacaacagcagtttggattcgagaattcgaaaacttgagaaacttgtaaaaa
agagattttaa
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