Trichinella spiralis: Tsp_03930
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Entry
Tsp_03930 CDS
T01609
Name
(RefSeq) putative ubiquitin carboxyl- hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsp01002
]
Tsp_03930
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_03930
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
Tsp_03930
Peptidases and inhibitors [BR:
tsp01002
]
Cysteine peptidases
Family C67
Tsp_03930
Ubiquitin system [BR:
tsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
Tsp_03930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
10904022
NCBI-ProteinID:
XP_003374741
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MTALNDSSSAYILLKTCKGRIALRKGRFEQVEVEPGCIFELDNSEHCSVGSQKMNLTLKS
LDVRGLFIECPSYYVDAMAKRHACLLLACSDFQERLKLYSDSEQLEKLLRAKAGEHVRVA
MNDGTYIAAIVHSVKPIKLDSPASNRYDEVRGCWRWYRFYKFVSIHPPQEGSLNGTAFPC
NRFFVSFDRISLPERVMHTPPAAVSVMTHPVQPHRENNRVRSADLELEFAELSTTKGFGN
LDSGHVAHYTPCLCSNDLAVLVGKPKGIQGHSNSCYMDTALFSMFSCCNAFDSYLLHCRK
DMDVKRKHIVDVLRCDIVYPLRKYQYVRADRVMEFRRLITEIAPDMKGFMEEEKDVEEFL
NLLFGRICQVEPDIKLSSNESSYLFQLICSDQQPSSQSCKTVVSVQQLLEQSFFDLNILL
KRIPTRFILQIPRYGKERLYRGVLPSLQLDISSILLCHPHVCWKCSSLADLQCLECYLTE
THWLNETFFCFNCFREFHCALKSEQDHAVVTLPSIDVRSPPSPVILQLAAVLCIESSHYV
SFVRVGDRPESDWIFFDSMADREGEETGHNVPEVRLCPDFSRWLSPENVDQLHRSTIDSN
VSAPFERLITDCYLCFYYWPDARDFMRSSCLMSVSTNALSSLFDSPSKPVEYFSKTADAR
PIASSLGVPACQSKARYRQSNWYAFSRNLSYATSTSYAALRDVPIFRKNFFITRSCCEES
QYFNKELKIEQTCSSCSSIEKYLRMLRLGGCMNNGKIVPKPPTSTTKFQAIHYSRVCFRQ
KEFSFSNDSAAIGHSRIELLHRPCR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgactgcactgaatgattcatcgtcagcgtatatacttttgaaaacatgcaaaggtaga
attgctttgagaaaaggcagatttgaacaagttgaagtagaaccgggttgtatttttgaa
ttggataatagtgagcactgttccgttgggtcgcagaaaatgaatttgacgttgaaaagt
ctggatgttcgaggtctgtttatcgaatgtccatcatattacgttgatgcgatggccaaa
cgtcacgcatgcctactattagcctgcagtgattttcaagaacggctgaagctgtacagt
gattcggaacaattggagaaacttctgcgcgcaaaagccggcgaacatgtccgagtggct
atgaacgatggcacttacattgccgccattgtacattcggtgaagcccatcaagttggac
agtccggcttcgaaccggtatgacgaagtacgcggatgttggcggtggtatcgattttac
aaatttgtttctattcatccacctcaggaaggaagtttgaacggcactgcttttccttgc
aaccgcttcttcgtctcattcgatcgtatctctttgcccgaacgtgttatgcacactcct
cctgctgctgtttcggttatgacgcatccggtacaacctcaccgagaaaataacagagtc
cgtagtgctgatttggaattggaatttgctgaactgtccactacgaaaggatttggaaac
ttagacagtgggcacgttgctcactacacgccatgcctttgttcgaacgatttggctgtt
ttagttggaaaaccgaaaggcatccaagggcacagtaattcgtgttacatggataccgct
ttgttttcaatgttttcttgttgcaacgcgtttgacagctatcttttgcactgtcggaaa
gatatggatgttaagcgtaagcatatagttgatgtactgcgttgcgacattgtttacccg
ttgcgaaagtatcagtatgtgcgtgccgaccgtgtgatggaattccggcgactgattaca
gaaattgctcctgacatgaaaggattcatggaagaggagaaagatgtagaagaatttctc
aatttactctttggtcgtatatgtcaagtggagccggacattaaactttcatctaatgaa
agtagctatttattccaacttatctgcagtgatcagcagccgtcatcgcaaagctgcaaa
accgtagttagcgtacaacaattattggagcagagtttttttgatttgaacattttatta
aagaggattcccactcgatttattctccaaatccctcgttatggtaaagaacgtctgtat
cgtggtgttttgccgtcattgcagctggacatatccagcattttgctttgtcatccacac
gtgtgctggaaatgttcatctttagctgatttacaatgtctagaatgttatttgacagaa
actcattggttaaatgaaacatttttttgcttcaactgctttcgagagtttcactgtgct
ctgaagagcgaacaggatcatgctgttgtcacgctgcccagcatagatgttcgatcaccg
cctagtcctgtgattttacagctagctgctgtattatgcatcgagagttcgcattatgtt
agctttgtaagagttggggaccgaccagaatcggattggatttttttcgacagcatggca
gatagagaaggagaagaaactggacacaacgttccagaagttcgtctttgtcctgacttt
agccgttggctatcaccagaaaatgtagatcagttgcatcgcagcacaattgattccaat
gtttctgcaccgtttgaaaggcttatcacagactgttatttgtgcttttactactggcca
gatgctcgagacttcatgcgatccagttgcttgatgagcgtttcgaccaatgctctgtct
tcgcttttcgattctccgtctaaacctgttgaatacttttcaaaaacagctgatgcaagg
ccaatagcttcatcgcttggtgtgccagcttgtcaaagtaaagctcgttatcgtcagtca
aactggtatgcgttttctcgaaatctctcatacgcaaccagtacttcttatgcagctctg
cgagacgttccaatttttcgaaaaaacttttttattactcgctcctgttgtgaagaatcg
caatactttaacaaggagctcaaaattgaacagacgtgctcttcgtgttcttctattgaa
aagtatttacgcatgctgcgactcggtggatgcatgaacaatggaaaaattgtacccaag
ccacctacttcgacaacaaaattccaagcaattcactacagtagagtttgttttcgtcaa
aaggaattttcattttcaaacgattcagcagccattggccatagccgcattgaactgcta
caccggccgtgtcggtag
DBGET
integrated database retrieval system
