Trichinella spiralis: Tsp_04213
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Entry
Tsp_04213 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K07206
tuberous sclerosis 1
Organism
tsp
Trichinella spiralis
Pathway
tsp04140
Autophagy - animal
tsp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
Tsp_04213
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
Tsp_04213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hamartin
ZnuA
Motif
Other DBs
NCBI-GeneID:
10904961
NCBI-ProteinID:
XP_003375029
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MLSRVAFVFFLKQTNDITFATGALYVLASLVPLLPSLSSHLNTLFNIFTAAAKLLHKHQN
TCVEGPLQKAVMTYCHSLYGLYPCNFISYMRSQFVAQSPNSSQQSLFTKPILKTITLHPL
MITSTKAAETIKDRWINKEPHDCFIESADVIVHRMDDSTCDGISAEGAATSNESTQRTFE
NSTDSVTTPSITHGLHYRSNGGNLPRPRHSTGPCFEEVICFDGELAISHENTPRLRCQTT
PRSEQELLVKRQKAVKQSKKFWNKTMDTSTCTATGSSLPCTPTGLGSSGSFSFGFNNDDC
AGTSHSSAVQTSQPQLNPRRSFGSSISKLFRLPQQMRPRSQTTTVIRTAIVRKTTPQGDS
TPQGEFTFPNVIQLNERDADAVALLKKAGTEPTEIAEEANEEDCVPELAQLNVASGQLTK
EPNIITAELPHCSSISSSTGHVFSGKSSSFFGPPHRMHSTTSAGQQQQQQQQQQQQQQQQ
QVRKQTQLTSWNCPALDSAVTTTRSSLLAKAEQAKNQHKAEKRMHKDFMQKRFSSSCPNL
TAITGDKTAMNSAVLKTLCSMSLFFPGFSPQFIEQQQLLLQQQQQLEINNKVGEKGSVFY
IHIGNSLSSFNAIRKLQLAEEKYIDLSVQLHLKIIQRSSNVEKKSPDVVAQNSGETENSD
ELDDISILKTKAELLECELELERCRREQHAERNRHLHERIKHMTSIEQHLQSKMIQVRWL
FHERSMINECVTKLEDEASRNRDAFAEKEKTWLKKYSQLKQLIKRKISSIDEKKRKLIQQ
LESSKQELKEKQLQAVECETTAQSSVMREKGLLLTVQKLQDRISNLTEQCTEAANIECEL
LKSKKRLADAECIAEQQKKQIDQLEEEPGRLSEKHKAALDEADALRLQIAEKDRCIEDLR
LQLAKRRELHCEKIGDMRKKCTELCNVSIKKEWQILDLHKRFAMANIDRRAATASTSTSS
SSSKADRARNLIFIPQRMARFPESIFPEYSFDDDTDSTTDLLSTLSKLTAEFKNIPPPAG
AAAAERSDSFH
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgctttcacgtgttgcattcgttttctttctgaagcaaaccaacgacattacttttgca
actggtgccctatacgtgttggctagtttggtgcccctgcttccaagtttaagctcacat
cttaacacactttttaacatattcacggcagcagctaaactgctacacaaacatcaaaac
acctgcgttgaagggcctttacaaaaggctgtaatgacttattgccatagcctgtacggt
ttgtatccttgcaatttcataagttatatgcgttctcagtttgttgcacaatctccgaat
tcatctcagcaatcactgtttacgaaacccatactgaaaacaattaccctgcatccgctc
atgattacaagcacaaaagctgccgaaacaattaaagacagatggataaataaagaacca
cacgactgttttatcgaaagcgcggacgtgattgtccatcgtatggatgattcgacgtgt
gatggcatttctgcggaaggggcagctacttctaacgagagcacgcagagaacatttgaa
aattcaacagacagtgtcaccacgccgtcgattacccatggactgcattacaggagcaat
gggggaaatttgccgagaccgagacattcaactgggccttgttttgaggaagtcatctgt
ttcgatggggagttggcaattagccacgagaatacgccaagactgcgttgccaaaccacg
cctagatctgagcaggaattgttggtcaagagacagaaggcagtgaaacagtccaagaag
ttttggaacaaaaccatggacacttcgacatgcacagctacaggctcttcgcttccttgc
acgccgacgggtctgggttccagtggcagcttttcgttcggtttcaacaatgacgactgt
gccgggaccagtcattcttcagctgttcaaacttcacagccgcagctgaatccacgaaga
agcttcggtagttccatttccaagctgttccgactgccccaacaaatgagaccccgctcg
caaaccacaactgttatccgtacggctattgtgagaaaaactacccctcaaggggacagt
acccctcaaggagagttcacttttccaaatgttattcaactaaatgaacgagatgccgac
gcggtggcgttgctgaaaaaagccggtactgagccaactgaaattgccgaagaggcaaat
gaagaagactgcgtaccggaactggcacagctcaacgtggccagtggtcagctgaccaaa
gaaccaaacatcatcaccgccgaattgccgcactgttcgtcgatcagcagctcaactggg
cacgtgttttctggcaaatcatcctctttcttcggtccccctcatcgtatgcacagcact
accagtgccggacagcagcagcagcaacaacaacaacaacagcaacagcaacagcaacaa
caagtacggaaacagacccagctgacaagttggaactgtccagcattggattctgccgta
acgaccacacgctcgtcgttgttggccaaagccgaacaggcaaagaaccaacacaaagct
gagaaacggatgcacaaagattttatgcaaaaacgtttctcatcatcttgcccaaatttg
actgccatcactggtgacaagacggccatgaacagcgcagtgttgaaaaccctttgttcc
atgtcgctttttttcccaggattttctccccagttcattgaacaacaacaactactacta
cagcagcagcaacagcttgaaatcaacaacaaagttggtgagaaaggaagcgtcttttac
attcacatcggcaattcattatcctcatttaatgcaatcagaaaattgcagttagccgaa
gaaaagtatattgatttgagtgttcaattacatttgaagatcatccagcgttcatcgaac
gtagagaaaaaatctcctgatgtagttgcacaaaacagcggtgaaacagaaaactcagat
gaactggatgatatatcaatcttgaagacgaaagcagaactgcttgaatgtgaactggag
ttggaacgatgccgtcgagaacaacatgctgagcgaaatcgtcatctacacgaacggatc
aaacatatgacctcaatagaacagcatttacaaagcaaaatgatacaggtgcgttggtta
tttcacgaacgttccatgatcaacgagtgcgtgactaagttggaggatgaagcttcacgc
aatagagatgcgtttgcagaaaaagaaaaaacatggttgaagaaatacagtcaactgaaa
cagctgatcaagcgcaagataagttcaattgatgaaaagaagcggaagcttattcaacag
ttggaaagttcaaaacaagagttgaaagagaaacagctgcaagcagtcgaatgcgaaacg
actgcccagtcgagtgtcatgcgggagaaaggtttgctcttgacagtgcagaaattgcaa
gatcgaatttccaatctgaccgaacagtgcaccgaagcagcaaacatagaatgtgaactg
cttaaaagtaaaaagcgactagccgatgctgaatgcatcgccgaacagcagaaaaagcaa
attgaccaactggaagaggaacctggcagattgagtgaaaagcacaaggctgcgttggat
gaagcggacgctctacgcttgcagatagctgaaaaagaccgatgtattgaagacctgaga
cttcagcttgccaagcgacgcgaactccactgcgaaaagatcggcgatatgcgtaagaag
tgcacagaattgtgcaatgtttccatcaaaaaggaatggcagattttggatttgcacaaa
cgattcgccatggcgaatatagatcgcagagccgctaccgcttctacctctacttcttct
tcaagcagtaaagctgatcgtgcccgtaatttgatattcattcctcaaagaatggccaga
tttccagaaagcatctttccagaatacagtttcgatgacgacacggacagtacgaccgat
ttgctctctactttatcgaaattgacagccgaattcaaaaatattcccccacctgctggt
gctgctgctgctgaaagaagcgattctttccactga
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