Trichinella spiralis: Tsp_04892
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Entry
Tsp_04892 CDS
T01609
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00052
Galactose metabolism
tsp00511
Other glycan degradation
tsp00531
Glycosaminoglycan degradation
tsp00600
Sphingolipid metabolism
tsp00604
Glycosphingolipid biosynthesis - ganglio series
tsp01100
Metabolic pathways
tsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Tsp_04892
09103 Lipid metabolism
00600 Sphingolipid metabolism
Tsp_04892
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
Tsp_04892
00604 Glycosphingolipid biosynthesis - ganglio series
Tsp_04892
00511 Other glycan degradation
Tsp_04892
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tsp_04892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsp04147
]
Tsp_04892
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Tsp_04892
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Tsp_04892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
10912754
NCBI-ProteinID:
XP_003369477
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MHCVLVLIKVRAAGLNAIQTYVPWNLHEPLPGEYYFDGMANLPVFLQTAQQLGLDVILRP
GPYICAEWENGGLPWWLLNIPNLKPRTSDGRFLNFVQRWFAELFSIVVPFLYKNGGPIIS
IQVENEYGSFPACDRNYMSELYHMIRAYAGEDTVLFTVDGNAVGLLRCGHVPGAHATVDF
GPSTLKEVEQAFAVQRFYAPRGPLVNSEFYPGWFDVWGKNHSRTQISPIVDSMAYMWYMN
ASFSMYVFHGGTNFGFMNCANGAGPLPVTTGYDYDAPLTEAGDLTPKYLAIREQIQHLTG
YAIPYPLPASTDKAAYGSLTVHALGKVTELLDLISPVHRRRISNQPLPFETIGIGYGYVL
YETRVPFHSTAGQYVLRAQGVRDRAYVMIDGQVQAILNSLTHHFRAKLHASVGQHLQILV
ENLGRQCSGHPDPKGILGSVTLDGQTLFNWTNYPIQPQLLFQFNLPVSTLSTRIPKSNPR
PRHHTYTPTIYASEFRLENPTADTFFHPKHWAKGQMYMNEINVGRYWPAAGPQMTLYVPK
NFLKPGTNRIVIFEFESAGCCSQNNSDTCTVEFIDFPLYKPAKNI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtgttcttgtactgatcaaagtgagagcagcaggcctgaacgctatacaaact
tatgttccttggaatcttcacgaaccactgcctggggaatactatttcgacggaatggcc
aatttgccagttttcctgcaaacagcgcaacagttgggcttggacgtgatcctccgccca
ggaccgtacatttgcgctgaatgggaaaacggtggtctaccttggtggttgttgaacata
ccgaatttgaagccacgtacgtcggatggtcgatttctgaacttcgttcagcgttggttt
gccgaactgttcagcattgtggtaccttttctgtacaaaaatgggggtccaattatcagc
atacaagtggaaaacgagtatggaagttttccagcctgcgaccgcaattacatgtccgaa
ttgtaccacatgattcgtgcctacgctggagaagatacagttctattcacagtcgacgga
aatgccgtaggtttgctgaggtgtggtcatgtgccaggcgctcacgcgacggtcgatttc
ggaccgtcaacgttgaaagaagttgaacaagcgtttgcggtgcagcgcttctacgcacct
cggggaccgttggtgaacagcgaattctatccgggctggttcgacgtctggggcaagaac
cattcgcggacgcaaatttcgcccatcgttgacagcatggcctacatgtggtacatgaac
gcctcgttcagcatgtacgttttccacggcggcaccaatttcggcttcatgaactgcgcc
aacggagcgggaccgttgccggtgaccaccggctacgactacgacgcaccgttgactgaa
gccggcgatttgacgcccaaatatctggcaatacgtgaacaaatacaacacttgaccggc
tacgcaataccgtatccgttgccggcttcgactgacaaagctgcatacggttcgttgacg
gtccacgccctgggcaaggtgaccgaactgctcgacctgatttcaccggttcacaggcga
cgcatctccaaccaaccgttgccgttcgagacgatcggcatcggctacggctacgtactg
tacgagaccagggtgccgttccacagcaccgccggccagtacgttcttcgtgctcagggt
gtccgagaccgagcatacgtgatgattgacggccaagtgcaagcaatactgaactcactg
acgcaccattttcgagccaaactgcacgccagcgttggacaacatttgcagattttggtc
gaaaatctcggccgccagtgttccggtcatccggatccgaaaggcattctcggaagcgtc
accttggacggtcagacgttgttcaactggaccaattatccaattcaaccccaactgctt
ttccaattcaacttgccagtgtcgacgttgtcaacaaggattccaaaatccaatcccaga
ccccgacaccacacctacaccccaactatttacgcgtcggaatttcgactggaaaatccc
accgcggacactttcttccacccgaaacactgggccaaaggacagatgtacatgaacgaa
atcaacgtcggtcgctattggccagccgctggaccccagatgacactgtacgtgccgaaa
aattttctcaaaccaggaacaaacagaatcgtaatttttgaattcgaatccgccggctgt
tgttcgcaaaacaactccgacacgtgcactgtagaatttatcgactttccactgtacaaa
cctgcaaaaaatatctaa
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