Trichinella spiralis: Tsp_06052
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Entry
Tsp_06052 CDS
T01609
Name
(RefSeq) putative thrombospondin type 1 domain protein
KO
K06051
delta
Organism
tsp
Trichinella spiralis
Pathway
tsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
Tsp_06052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
TSP_1
hEGF
EGF_CA
EGF_2
Motif
Other DBs
NCBI-GeneID:
10911343
NCBI-ProteinID:
XP_003380320
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MSTFEVLLIFLLCFNVQKALSNSSSSCPADTYPDVYRGGRRDVNHCTTFVLSKELKTTKN
MPETKGDNTLLGKMVNFCKYHFKNGQLLSYLNEDAIRYHQYYKYPEKEIIVHSGTEVGIT
RFERNVPRYHKLWKTNKPHECYMNTAIFFNRSSDKISTTHMERCVNYFYGFKKTSEYEHL
IMHPWWQNYSIAESEKKYRMGLHSMCRCMRIQSETNEYKFATPVLNCSADNCEYFACVSA
SYKNCIDERIEQCTFSPNENICREYTYVRHQEADIPYGKECPERDYGEICECPCSDLEWS
EWSAKSTTCGPYTRERYKVIKGFENVEVDCTQERYKCCFSIEEGLQTDCKDFFINSNKTI
MEHNETCTKNDGTIIKTEAGYFCECDDSRHGTLCEKSYTFCEDHPNICQNGGKCFNAGSS
YICSCTSDFQGVNCTIPEITCNNGKECLNGGNCSLVDGKHICVCSPVYTGKFCESHTGLC
KKNSCKNGGCCAVLSETHFQCLCAHGFKGTLCEEAVSTLEEIAITLSNSYVTMVIAICSL
VAVAFLYLSGKAVRRHRKRRRARYSKQRKAPTEPKTLSTETNL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacattcgaagttttgctgatttttctcctttgcttcaacgttcagaaagccctg
agtaattcttcttcttcttgcccagccgatacgtatccagatgtgtacagaggtggaaga
agagatgtcaaccactgcacaacattcgtactttccaaagaattaaaaactacaaaaaac
atgccagaaacaaaaggcgacaacactttgctcggaaaaatggtcaacttttgcaaatat
catttcaaaaatggtcaactgctatcttacttgaatgaagacgcgattcgctatcaccaa
tactataaatatccagaaaaagaaataattgtgcattctggaacggaagtaggcataact
aggtttgaaagaaacgtacccaggtatcacaaactttggaaaacaaacaaaccgcatgag
tgctacatgaacacggcgattttcttcaatcgaagttcagataaaatatcgactactcac
atggaacgatgtgtaaactatttttacggtttcaaaaaaacgtcagaatatgaacatcta
attatgcatccgtggtggcaaaattacagtattgctgaatctgaaaaaaaataccgcatg
ggattacactcaatgtgcagatgcatgagaatacaaagtgaaactaatgaatataaattt
gccactccggtattgaattgttcagctgacaactgcgaatatttcgcttgcgtatctgca
agttacaaaaactgtatagacgaaagaattgaacaatgtacattttcaccaaatgaaaac
atatgccgagaatacacttatgtacgtcaccaagaagccgatataccgtatggaaaagaa
tgccctgaacgtgattatggagaaatatgcgagtgtccttgttcagacctagagtggtca
gagtggtctgcaaaaagtacaacttgcggtccatacacaagagaacggtataaagtcata
aaaggattcgaaaatgtcgaagtggactgtacacaagaaagatacaaatgctgcttttct
attgaagaaggattgcaaactgattgcaaagatttttttatcaactccaacaaaaccata
atggaacataatgaaacatgtacaaaaaatgatgggacgataataaaaaccgaggctgga
tatttttgcgaatgtgatgacagtcgtcatggaacattatgcgaaaaaagttacacattc
tgtgaagaccatccaaatatatgccaaaatggtggaaagtgcttcaatgcgggaagttca
tatatttgttcttgcacttcggattttcaaggcgtaaactgcactatacctgaaatcacc
tgcaacaacggcaaagaatgtttaaatggaggaaattgttcgcttgtggacggtaaacac
atctgcgtgtgtagcccagtttacacaggcaaattttgcgaaagccatactggcttgtgc
aagaagaattcttgcaaaaacggtggctgttgtgcagttttaagtgaaacacacttccaa
tgcctttgtgcacatggcttcaaaggcaccttatgcgaagaggctgtcagcacactcgag
gaaattgcaataacgctatcaaattcctatgtaactatggtaattgccatttgttcatta
gtggcagtggctttcctttacctaagtggaaaagcagtgcgccgccatcgaaagcgacgt
cgagcaaggtattctaagcaacggaaagctcccacagaaccgaaaacgttatccacagag
acaaatttgtaa
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