Trichinella spiralis: Tsp_08267
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Entry
Tsp_08267 CDS
T01609
Name
(RefSeq) ubiquitin carboxyl- hydrolase BAP1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
tsp
Trichinella spiralis
Pathway
tsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
Tsp_08267
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsp01002
]
Tsp_08267
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_08267
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_08267
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
Tsp_08267
Peptidases and inhibitors [BR:
tsp01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
Tsp_08267
Ubiquitin system [BR:
tsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
Tsp_08267
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
Tsp_08267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
10905692
NCBI-ProteinID:
XP_003375270
UniProt:
E5SJ40
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MQKHLEEESWAELESDPGLFTLLIEDFGVSGLAVEEIYDLQSPLNSRTYGFIFLFKWLGE
HRRGRRELWDFNAKSENNVLNHRLFFAKQKVSNSCATYALLNILLNLNDITIGPLLKNIK
ELTKGLDPESSGVIVANTSELARCHNKHARPDAVRELKKQANRPVRRSVVYSSSKQDRFH
FSSYIQFDGHLYELDSLKDFPIDLGEISANTPWTDYFQKIVLERFSNSNVHSNEIRYNLM
AVIPCPIVEAEEKLGILKANVQILTQILEKFVGSKLRTDKKLGVEERRRRLLLFCESSFK
STKCTDSKCSCFSMPNGISSIEQLLSQSVVNDWFFHRNRKFINLKLTVSSAQVVVFKICV
TKLIALLNYVESEIGQVKMEINALKERKEQFLVDDARRVHDYEPFIRTFLTAMAEKK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacatttggaagaggaatcttgggcagaattggaaagcgatccaggtttattt
actctgctcattgaagattttggtgttagcggactggcagtggaagaaatatacgacttg
caatcgccattgaacagccgaacctatgggtttatatttttgttcaaatggttgggggaa
catcgtagggggcgacgcgaactttgggacttcaatgcaaagtcagaaaataatgtactg
aatcatcgactattttttgcaaagcagaaagtatcaaattcttgtgccacgtatgctttg
ttgaatattttgttaaacttaaatgatataactattggtccactgttgaagaatataaag
gaattgacgaaaggcttagatccagaaagtagtggtgtaatagtcgcaaatacctctgaa
ctggcacgttgtcacaacaagcacgctagaccagacgctgtgagagagttgaagaagcaa
gcgaaccggccagtgcgtagatccgtagtatattcttcatctaagcaggacagatttcat
ttttccagttatattcaatttgatggtcatttgtacgaattggacagcttgaaagatttt
ccaattgatcttggcgagatatcagcaaacactccatggacagattactttcagaagata
gttttggaacgattttcaaattcgaatgtacattcgaatgaaattcggtacaacttgatg
gcagtgatcccttgtccaattgtggaagcagaagaaaagctgggcatcttgaaagctaac
gtgcaaatattgacgcagattctggaaaagtttgtcggttcgaaactgaggacagataaa
aaattaggcgtggaagaacgccgccgtcggctgctgttgttctgtgaatcatcatttaaa
tcaacaaaatgcaccgattcaaaatgctcatgtttttcaatgccaaatggaattagcagc
attgagcagcttctgtctcaatctgttgtcaacgattggttttttcatcggaatagaaag
tttatcaatttgaaattaacggtatcatcagctcaagtggttgtattcaaaatttgcgtt
actaaactgatcgccctattgaactacgtcgaatcggagattggacaggtgaaaatggaa
attaatgcattgaaagaacgaaaagaacaatttcttgtcgatgatgctcgtcgagtgcac
gattatgaaccgttcataagaacatttctaactgccatggcagaaaaaaaataa
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