Trichinella spiralis: Tsp_08584
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Entry
Tsp_08584 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K24970
transcription factor 25
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_08584
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Tsp_08584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tcf25
zf-H2C2_2
SR-25
CCDC106
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
10907018
NCBI-ProteinID:
XP_003373857
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MFIFYFKQNVAKVYSRPDNILQNKDDSVIETDQVIDTSVSVVVECENLAKNNPVTVKLAR
KQSNPSTTPSSKSTTIATSDSDDEDKFAPLSGDSEVEKSTPAKDLAKKQNNSKKRKKKAQ
KKKVESKKPPANEEDIDKILEEFKEMEVAPKESPKLNVEKLLTVQYRNLQPENEYDRKRG
VVRKNRMPRAAGRMVIPKPLWPDLKYAGITMQRYNCALDPQLLYFTFDYDVRYRIFEQQL
QAHSIPSPHLIFRILGYVPYHIPALIQASECAVSTGNYENAQEFAVFCRGFFIVLMKQMF
FCMRRELYRTALEYAKVIYNLNPEEDPLAVVLIIDYLFLVNKEYEKFVLFYTAKEKAVSL
QALPNMSYSIALARFFIAQKSGLQEDYEAADKALLEAMVRFPTLLPALFNTLNLDYRPAE
YFSVWCYKKFFREDKSSLVLLYDLYMARIAFVWKEKGVAEWVKKICRQFGRYMKEADSEF
AKQMAEYTIIRNRCYYGVPTNVLRHLYLMNFRHLLSGTEEMKRIHIVQPCDPFPPIHVRR
HQGVAPYVCKRCGISFASIVEKEEHVEKTHLGAKDSKSSSSLESYDMKRLFEEPMEQEDK
ADRGVQSPESLVVDTELKEEVLNQLMNLKLSSPVKPVAPKQEYCTCFESKSVKSYENDDG
NSKNQLIDVSGNSAVGGKVIKNFWRSEVAITVKGKGKDKNPIPNIISSIRKHKAEEELLY
EFFTVEERFRKAQMSMKLRFKKAKKDRDQE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtttattttttattttaagcaaaatgtagccaaagtatacagccgaccagacaatatc
cttcagaataaagatgattcggtgatcgaaacggaccaggtgatcgacacatccgtttca
gttgtggtggagtgtgaaaatttggccaaaaacaacccggtcactgttaaattggcaaga
aagcaaagcaacccaagcaccacgcctagtagcaagagcaccacgattgccacatccgac
tccgatgatgaagataaattcgcgccattgtcgggcgattcagaagtggaaaagtcaaca
cctgctaaagatttggcaaaaaagcaaaataattcgaaaaagcgaaagaagaaagcacag
aaaaagaaagtcgagtcgaaaaagccgcctgcaaacgaggaagacattgacaagatactg
gaagaattcaaagaaatggaagttgcgccgaaagaatcgccaaagttgaatgtggagaag
ctgttgactgtgcagtatcgcaatttgcagcctgagaacgagtatgatcggaaaagaggg
gttgtacgaaaaaataggatgccaagggcagctggccgcatggtgattccaaagccgtta
tggccagatttaaaatatgcaggcataacaatgcagcgctacaactgcgctttagatcca
cagctcttgtactttacttttgattacgacgttcgctacagaatttttgagcagcagctt
caggcgcattccatcccttctccacatttgatatttcgcattctgggttatgtaccgtat
catattccagctttgatacaggcaagtgaatgtgcagtttcgacaggaaattatgaaaat
gcacaagaattcgccgttttttgtagaggtttctttattgtacttatgaagcagatgttt
ttctgtatgcgtcgtgaattgtatcgcactgctctagaatatgctaaagttatatacaat
ttgaatcctgaggaagatccacttgcagtggtgttgatcattgactatttgtttttggtt
aacaaagagtatgaaaagtttgttcttttttacacggcgaaagagaaggcagtatcattg
caagcgttgccaaatatgtcttattcgatcgcattggcacgattttttatcgctcagaaa
tctggcttgcaggaagattatgaggctgcggacaaagctctgttggaagcgatggtgaga
tttccaacactgttgccagcgttgtttaacaccttgaacctggattaccgaccagccgaa
tacttcagcgtttggtgttacaagaaattttttcgagaggataagagcagtttggtattg
ttgtacgatttgtacatggcgcgaatcgcttttgtgtggaaagagaagggagttgccgaa
tgggtcaagaagatttgtcgtcaatttgggcggtatatgaaagaagctgatagtgaattt
gcgaaacaaatggccgaatatacaattattcgaaatcgctgttattacggagtcccgaca
aatgtattgcgtcatctttacttgatgaatttccgtcacctgctgtctggcacggaagag
atgaaaagaattcatattgtccagccatgcgatccgtttccaccaattcacgtaaggcgc
caccaaggagttgcaccgtatgtttgtaagcgctgtggaatttcttttgctagtattgtt
gagaaagaagagcacgtggagaaaacacaccttggtgccaaagattcgaaatcctcatca
tcactggaatcgtatgatatgaaacgattgtttgaagagcccatggagcaagaggataaa
gcggaccgtggcgtacagtcaccggaaagtctggtagtggatacggaactcaaagaagaa
gtactgaaccagttaatgaatctaaaattgtccagtcccgtgaaacccgtggcacccaag
caggaatactgtacatgttttgaatcgaaatcagttaaatcgtacgaaaatgatgatgga
aattcaaaaaatcagctgattgatgtttctggaaacagcgcagttggcggaaaggtcatc
aaaaacttttggagaagtgaagttgccatcaccgttaagggcaagggaaaggacaagaat
cccattccaaatattatttcgtccattcgaaaacataaagctgaagaagaacttctctat
gagtttttcactgtagaggagcgattcagaaaagcgcaaatgtcgatgaagctccgtttc
aagaaggcgaaaaaagatcgcgaccaagaatag
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