Trichinella spiralis: Tsp_09573
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Entry
Tsp_09573 CDS
T01609
Name
(RefSeq) putative protein lin-10
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_09573
Membrane trafficking [BR:
tsp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
Tsp_09573
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
Tsp_09573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PID
PDZ_6
D123
Motif
Other DBs
NCBI-GeneID:
10902999
NCBI-ProteinID:
XP_003371336
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MAEMDACECRASSSPESSETTPTLMAPVNDHHLTLHLPQGFSTTTNGSAETTVVTGEQYS
YPQFNEEDLLTYFNRLKMYCDAAATPTQSKATSPRRRLQPVFGHESLAYDATSPIQPELI
DCHFANQLSNIYKCEQRRSSRSALAEIPQHMPEVSTENVSHRCQSLPSLDEANSVEEEVS
KESSSDKLPEDKDRPLNVSADLIDRKMEELQQQLTNITKTNASLVASKINWSSRKCSNYA
ALAAESPNGKGRTLNELAASSSEEGLKINKKVESDMDNTTRHVDHQLSGGLKCPTFSVGV
PAVTVPPLHLLPLAPAKNSLELAKQLEEYAALLRASSADAKPLHNNGAPVERLSLVSATE
QVPSDCHCENHISETVEQSDISEFSTVNSEDHVWVLRSSFRRRQNLERQQKECKEALHRS
QSSPTMPKHILEENDDTEGETDQLLKVQNNDSKSSVPAPCNQEEAHDVITVIVIHFTVVK
NDVFTVVFIRSLELRSVLYEAALLYYVVNALRIDLYSVLITMIVHEPAVLIEGVLFRARY
LGSTQIVSEGPTTKASRMLQAQEAVSCIKAPDGESQPATDVDLFISTEKIMVLNTDMQGM
INEKLDGFVLHCNKSDDDCNFRGCPRQTCVSYIADIGDLVVLMARRVSHSSTSTASHGIL
AVPKMICHVFESEEAQFIAQSIGQAFQVAYMEFLRSRGIDDPTYVKELDYQQVLNSQEIY
CDELEMFSNRETQKDIVIPKRKDEPLGVAVVESGWGSMLPTVVIANMLPEGAAARCKKIN
IGDHIIALNGISFVGLPLNICQNHIKDARSLTAVKITIVQTPPVVEVRIKRPDTKYQLGF
SVQNGVICSLLRGGIAERGGIRVGHRIIEINGQSAVAVPHEKVVTMLATAVGEVLATMIY
YIHMKTMRTSMFRMLTGQETPHFL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatggatgcatgtgaatgtagagcgtcttcatctccagaatcttcggaaaca
acgccaactttaatggcgccggttaatgaccatcatctgacacttcatcttcctcaaggt
ttttctacaacgactaatggtagtgcagagacaacggtggtcactggtgaacagtattct
tatccacaatttaatgaagaagacttgctcacttattttaaccgattgaaaatgtactgt
gacgctgccgctacgcctacacaaagtaaagcaaccagcccaaggcgaagattgcagcct
gtgttcggccatgaatcacttgcgtatgacgcaactagtcctatacaacctgagcttatc
gattgccattttgctaaccaactttccaatatatataaatgtgaacaacgtcgttcatca
cgaagtgctttagctgaaataccccaacacatgcccgaagtgtcgacagaaaatgtctcg
catcggtgccaatcgctccccagtcttgatgaagcaaacagtgtcgaagaggaagtgtct
aaagaaagcagttctgacaaactgccagaagataaagacagacctttgaacgtgtcagca
gatttgattgaccgcaaaatggaggaactgcaacagcaattgaccaatatcaccaaaact
aacgctagtctcgtcgcttccaagataaactggagctccaggaaatgttcgaactatgct
gctcttgctgcagaatctccaaatggaaaagggcgtacattgaacgaactcgctgcaagt
tcttctgaggaaggattgaaaataaataagaaagttgaatcagatatggataatacaact
cgacacgttgatcatcaactcagcggtggtttaaaatgtccaactttttcagttggtgta
cctgcagtgactgtgccgccattacatttattgcctttggcgccagcgaaaaattcgttg
gaattggcaaagcagctggaagaatatgctgctctgttaagggcatcgtcagctgatgcg
aaaccattacataataatggtgcacccgtagaaaggctgtctttggtttctgctactgag
caggttccatcggactgtcactgcgaaaatcatataagtgaaacagtagaacagtcggat
ataagtgaatttagcactgtgaatagtgaagatcacgtttgggttctcaggtcatctttt
cgacgtcgacaaaatttagaacgtcagcagaaggaatgcaaagaagcgttgcatcgatca
cagtcttcgccaactatgcctaaacatattttagaagaaaatgatgatactgaaggggaa
acggatcagctgttgaaagtccaaaataatgatagcaaaagttctgtccctgctccttgt
aatcaggaagaagcacatgatgtcattactgtcatagtgattcactttactgttgttaag
aatgatgtttttacagttgtgttcatacgtagtttagaattacgatctgtgctttatgag
gcagcgctactgtattatgttgtgaacgcgcttcgaattgatttgtactccgtgttgatc
actatgattgttcatgagcctgcagtgctgatcgaaggtgtcctgtttcgggctagatat
ctcggttcaacacaaatcgtaagtgagggcccgacaactaaagcttctcggatgcttcaa
gcacaggaagcggtttcttgtattaaggccccagatggtgaatcacagccggcaactgat
gtcgatttattcatttccacggagaaaattatggtgcttaatactgacatgcagggaatg
attaatgagaagcttgacggttttgtgttacattgtaacaaatctgatgatgattgtaat
tttagagggtgtccgagacagacgtgcgtcagttacattgctgatattggcgatttggtt
gttttaatggccagacgtgtttcgcattcctctacatcaactgcttcacatggtattcta
gcagtgccgaagatgatttgtcatgtgttcgaatcggaagaggcgcagtttatagctcag
tcgattggtcaagcttttcaagttgcatatatggaatttttgcgttctcgaggaattgac
gatccgacttatgtcaaagagcttgattaccagcaagttttgaattcccaagaaatttat
tgcgatgagttggaaatgttttctaacagagagactcagaaagatattgttataccgaaa
cggaaagacgagcctttgggtgtagcagttgttgagtccggatggggaagcatgttgccg
acggtggtgattgcgaacatgttgccagaaggtgcagcagctagatgtaaaaagattaac
atcggagaccacatcatcgcgttgaatggaatctcgtttgtcggtttgcctttgaacata
tgccagaatcatatcaaggatgctcgttcactgacagccgtcaaaattaccattgttcaa
acgccaccagttgtagaagttcgtatcaaacgtccggacacgaaatatcagcttggtttt
agcgtgcaaaatggtgtaatttgtagtttgcttcggggtggcatcgctgaaaggggtggt
atacgtgttggccatcgcattattgagatcaatggtcaaagtgcagtggctgttccacat
gaaaaagtggtaaccatgttggccacagctgtaggcgaagtacttgctacaatgatatat
tacatacatatgaaaacaatgcgaacatctatgtttcgaatgttaactggccaggagacg
ccgcactttttgtaa
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