Trichinella spiralis: Tsp_11147
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Entry
Tsp_11147 CDS
T01609
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tsp
Trichinella spiralis
Pathway
tsp03082
ATP-dependent chromatin remodeling
tsp03083
Polycomb repressive complex
tsp04213
Longevity regulating pathway - multiple species
tsp04330
Notch signaling pathway
tsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Tsp_11147
03083 Polycomb repressive complex
Tsp_11147
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
Tsp_11147
04350 TGF-beta signaling pathway
Tsp_11147
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
Tsp_11147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_11147
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Tsp_11147
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
Tsp_11147
HDAC complexes
Sin3A-HDAC complex
Tsp_11147
BRAF-HDAC complex
Tsp_11147
REST complex
Tsp_11147
SHIP complex
Tsp_11147
MiDAC complex
Tsp_11147
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
Tsp_11147
Heterochromatin formation proteins
Other heterochromatin formation proteins
Tsp_11147
Chromatin remodeling factors
NuRD complex
Tsp_11147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
10913592
NCBI-ProteinID:
XP_003372126
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MHHEKYHGFYKSMKNVNLKIRIRNNYFKRSSHPAVLKSVFTWGVDIFLLNLYVPVSWISS
VLCLLSEKKKYSLLSTCAYLLPALRVYSNFALFSCNAGLCKHESGSSALPNMPGLVEPSV
EQASIVGPLLTHLMKPFRAAMTDSLVQSYGLTQCMKVMKTEWASEDDLKVFHTNEYIEAI
KVATKTKSKKRGGDADCPEFFGVLEYCRAVAGSSLSSARVMNMRTSDIIINWNGGMHHAK
SYEASGFCFINDIVLAILELLKVYDRVLYVDIDCHHGDGVEEAFYTTNRVMTVSFHKYGD
FFPGSGRLEDIGLDEGEKYAVNVPLNSGIGDANYVALFRMIITKIVEHFRPSAIVMQCGA
DSLAHDRLGCFNLSVSGHGECVKFVRSLQIPLMLLGGGGYSLHNVARCWTYETSIALDVP
INNDLPFHEYYNFYSPSFKLHLPAAKNVLDMNGTRYLEYIGKYICENIPAYERNSLYVKL
TYLTFVDNKNSGSSSPGKDSEDSESSSPPEDSELLDIFEENEWLPVNNQVKELAYTLNPE
CSIRIWRQEYSVLKIFILSMQNVHSNLTSYELSHREEEESAEQC
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatgagaaatatcatgggttctataagtctatgaaaaacgtcaatcttaaaata
agaattcgcaacaattatttcaaacgatcatctcatccagcagttttgaagtcagtattt
acttggggtgtagacatttttttattgaatctgtacgttccagtttcatggatatcatca
gtattatgtttactcagtgaaaagaagaaatacagtctgctctcaacatgcgcgtattta
cttcctgcattacgtgtttactcaaattttgcgttattctcatgcaatgctggactgtgc
aagcatgaaagcggaagttctgcgcttccaaacatgcctggactagttgaaccgtctgtg
gagcaagcgtcaatcgtgggaccgttgctgacacacctaatgaaaccattcagagctgca
atgacagactctttggtacaaagttatggattgactcagtgtatgaaagttatgaaaaca
gaatgggcatcggaagatgatttgaaagtttttcataccaatgaatacattgaagcaata
aaggtggcaacgaaaacaaaatctaaaaaacgtggtggtgatgcagactgtccagaattt
tttggcgttcttgaatactgtcgtgccgttgctggctcctctctttcaagtgcacgtgtt
atgaatatgagaactagtgatattattataaattggaatggtggtatgcatcacgcaaaa
agttatgaagcgtctggattttgtttcatcaacgatattgtattggctatcttagaattg
ttaaaagtttatgacagagtattatatgttgacattgactgtcatcatggagacggagtt
gaagaagcgttttacacgactaatcgagtcatgacagtatcatttcataaatatggtgat
ttttttcctggaagcggtcgactggaagatattggcttggatgaaggagagaagtacgct
gtgaacgttccgttaaattctggaattggtgatgcgaactatgtggcgttgtttcgaatg
attattacaaaaattgtcgaacattttcgcccatctgctattgttatgcaatgtggcgca
gattcactggcacacgaccgtttgggttgcttcaatctttcagttagcggacacggtgaa
tgtgttaagttcgttcgatcgttgcagattccgcttatgttgttaggaggtggtggatat
tccttgcataatgttgctcgttgttggacctatgaaacatccattgcgttagacgttcca
ataaacaatgatttaccctttcacgaatattacaatttctattctccttcattcaaactg
caccttccggctgctaaaaatgtgttagatatgaacggaacgcgttatttggaatatatt
ggaaaatatatttgtgaaaatataccagcatatgaaagaaacagtctttacgtgaaattg
acatatctcacttttgtagataataagaattctggaagcagcagtccaggtaaggattct
gaggatagtgaaagcagtagtccgcctgaagattctgaattactggatatattcgaagaa
aatgaatggttgccagtaaataatcaagtgaaagagttagcatatactctaaatccagag
tgctccatccgtatttggagacaagaatacagtgtgcttaaaattttcattttgtctatg
cagaatgttcattcgaatttgacatcatatgaattatcgcatcgagaagaagaagaatca
gcggaacagtgctaa
DBGET
integrated database retrieval system