Trichinella spiralis: Tsp_12250
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Entry
Tsp_12250 CDS
T01609
Name
(RefSeq) protein TSSC1
KO
K23289
EARP and GARP complex-interacting protein 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_12250
Membrane trafficking [BR:
tsp04131
]
Protein recycling
Others
Others
Tsp_12250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
DUF4467
Clavanin
Motif
Other DBs
NCBI-GeneID:
10900601
NCBI-ProteinID:
XP_003367245
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MNVIIQLKYAIPLLVFMDDASEDTFIFGLDFQARSLATLINDEEKSIFIAGTQSLKNENQ
IYYFAYDENSDQKLFKQTFPHDAGEIWYLAGCPIQGDLVSVHFAVISSCIDNCKPKCSIW
RLKSLQGSTTETLQLNETATIDVEGHRYVPRFLWKPFSASEACILIGSHLIFVDLKNGME
QFNKRKVTVNEDSQNPLAVAKWDPHHDSCCLTLAQGTAIFGWDSRSNKQTYLIEDAHSLC
IRDLDFNPNRPYYLMTGANDGFIHFWDIRKTKERIARFAHHSHWVCSVRFNPVHDQLFLS
SSTDSKVVLWCAASFSSESKLISSIPDGPLREYDDHEESVYCCEWSACDPWVFASLSYDG
RIVIKRVPRDLKYTILRLYSDN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatcatacaattgaaatatgcaattcccctattggtttttatggatgatgct
agtgaagacacatttatttttggtttggattttcaggcaagaagtttagctactttaata
aacgacgaagaaaaatctatttttattgccggaacgcagtcgctgaaaaacgaaaatcaa
atatactatttcgcatatgacgagaattcggatcaaaaattatttaagcagacctttcca
cacgacgctggtgaaatttggtatcttgctggttgtcctattcaaggagatttggtgtca
gttcattttgctgttatatcttcgtgtatagataattgcaagcctaaatgttcaatttgg
aggctgaaatcattgcagggaagcacaacggaaacgcttcaattaaatgaaaccgcgaca
atagacgtggaaggacatcgatatgtacccagatttttgtggaagccattttcagcatct
gaagcttgcattttgatcgggagccacttgatttttgtagatctgaagaatggcatggaa
cagtttaataaaagaaaggtaactgttaatgaagattctcagaatccgttggctgtcgca
aagtgggatcctcatcatgatagttgctgtttaacgctggcacaagggacggcaattttc
ggttgggatagtcgaagcaacaagcagacatatttgatcgaagatgcccattcactctgc
attcgagatttagacttcaatcctaatcgtccatattatttgatgactggagctaatgat
ggttttattcatttttgggacatccgaaagacgaaagaaagaatagcaagatttgctcat
cattctcactgggtatgctcagtccgatttaatccagtgcacgatcaattattcttaagc
agtagtactgactcaaaagttgtactttggtgtgctgcatcttttagttccgaatcgaag
ttaatttctagcattcctgatggacctttgcgggaatatgacgatcacgaagaatcagta
tattgttgtgaatggtcggcttgcgatccgtgggtatttgcgtcactttcttacgatggg
cgtatcgtaataaagcgtgtaccgcgcgatctgaaatataccattttgcgtttgtattct
gacaactga
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