Trichinella spiralis: Tsp_13033
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Entry
Tsp_13033 CDS
T01609
Name
(RefSeq) putative F-box/LRR-repeat protein 2
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_13033
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
Tsp_13033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
10906000
NCBI-ProteinID:
XP_003368326
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
TWSKKTLSQTKNSSKVVNFNFVTVKQIVVSANCTLGRDLPIKRRQLISEEPIRKIRSNFI
AGEKYESSLSSSSGWEKLNLLDIYKSEIENRCAACVVENLAKRCGGFLKKLSLRGCESVQ
DGALDTFARKCNFIEELNPEKCKRLSDSTCESLGLHCKRLRVLNLDCISGITERGLKFIS
DGCPNLEWLNISWCNHISDEGLEAVAKGSKRMKALICKGCTGLTDEGLRHVGEHCHDLRV
LNLQSCSHITDQGISYIANGCHRLDYLCLSMCSRITDRALQSLSLGCQLLKDLEVSGCSL
LTDSGFHALAKNCHDLERMDLEDCSLILLELLTQHRIVSHDAPLTLQSDPNECSFPDLNI
DN
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
acatggtcgaagaaaacattaagtcaaacgaaaaacagcagtaaagttgtcaattttaat
tttgtgacagtcaaacaaatagttgtttcagctaactgtacacttggaagggatttaccg
atcaaacgccgtcagcttatcagcgaagagccaatcagaaaaataagatcgaattttata
gcgggtgaaaaatatgaatcttcactatcatcgtcatcaggatgggagaaactaaatttg
ttagacatttataaaagtgagattgaaaaccgctgcgctgcatgcgttgttgaaaatttg
gccaaacgttgcggcggctttttgaaaaagctgagccttcgaggctgtgaaagtgttcaa
gatggagcattggacacattcgcacgaaagtgcaatttcattgaagaattgaatcctgaa
aaatgcaaacgcttgagcgacagtacatgcgaaagtttgggtttgcattgcaaacggttg
agggtgttgaatttggattgtatttcggggatcaccgaacgaggcttaaaatttatcagt
gatggatgcccaaatctggaatggttgaatatctcttggtgcaatcacatttcggacgaa
ggcttggaagccgttgctaagggcagcaaaagaatgaaggcgctcatttgcaaaggctgt
acagggttgacggacgaaggcttaagacacgttggtgaacattgtcacgatttacgggtt
ctcaacttgcaaagttgttcgcatatcactgaccaaggaatcagttacatagcaaacggt
tgccatcggctggattatctttgtttatccatgtgttctagaataacagatcgagctcta
cagtctttgtctcttggatgccaactgcttaaagatttggaagtgtccggatgttcattg
ttaacggacagtggtttccatgctttggctaaaaattgtcacgatcttgaacgaatggat
ttggaagattgttctttgattcttcttgaactgctaactcaacatcgaattgtgtctcac
gatgcgccacttacacttcaatcggaccccaatgaatgttcgtttcctgatttgaacatt
gataactaa
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